RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 IL23AQ9NPF7 189 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 ADAP2Q9NPF8 381 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 NUDT15Q9NV35 164 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 LYARQ9NX58 379 aaKnown RBP12.81□□□□□ -0.36
PHGDH-233ENST00000642021 NCKAP1Q9Y2A7 1128 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 P2RX6O15547 441 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 TSC22D2O75157 780 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 SC5DO75845 299 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 SYPP08247 313 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 F8A1P23610 371 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 BTG1P62324 171 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 NTRK2Q16620 822 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 CREB3L2Q70SY1 520 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 SLC38A6Q8IZM9 456 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 LINC00469Q8N7U9 141 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 TOR1AIP2Q8NFQ8 470 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 OR11H7Q8NGC8 314 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 OR4K14Q8NGD5 310 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 OR52L1Q8NGH7 329 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 OR5J2Q8NH18 312 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 SMARCD2Q92925 531 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 TRAF4Q9BUZ4 470 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-233ENST00000642021 GHITMQ9H3K2 345 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 FN3KQ9H479 309 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 CCDC86Q9H6F5 360 aaKnown RBP12.81□□□□□ -0.36
PHGDH-233ENST00000642021 MEPEQ9NQ76 525 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-233ENST00000642021 KLHL1Q9NR64 748 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 TBC1D29Q9UFV1 150 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 SIGLEC7Q9Y286 467 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 CACNG2Q9Y698 323 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 ZNF860A6NHJ4 632 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 FZD7O75084 574 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 SOX30O94993 753 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 CD3GP09693 182 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 SBK2P0C263 348 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 NDUFS1P28331 727 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 ACSL1P33121 698 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 OR3A3P47888 321 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 TNFRSF17Q02223 184 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 C19orf57Q0VDD7 668 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 CEP78Q5JTW2 689 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 TANGO2Q6ICL3 276 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 ESPNLQ6ZVH7 1005 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 ASPGQ86U10 573 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 AMIGO1Q86WK6 493 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 GAL3ST3Q96A11 431 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 PHF21AQ96BD5 680 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 BPIFA2Q96DR5 249 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 PEX11GQ96HA9 241 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 ZNF350Q9GZX5 532 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 SLC6A17Q9H1V8 727 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 FOLH1BQ9HBA9 442 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 ADGRL4Q9HBW9 690 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 FGF22Q9HCT0 170 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 CMC2Q9NRP2 79 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 SLCO1C1Q9NYB5 712 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 ZNF624Q9P2J8 865 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-233ENST00000642021 CDHR4A6H8M9 788 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 PRR23D1E9PI22 279 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-233ENST00000642021 KCNJ13O60928 360 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 MT-ND5P03915 603 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 PRR23D2P0DMB1 279 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-233ENST00000642021 CXCL3P19876 107 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 POU3F3P20264 500 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-233ENST00000642021 AK4P27144 223 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-233ENST00000642021 RBMS1P29558 406 aaKnown RBP12.8□□□□□ -0.36
PHGDH-233ENST00000642021 IGFALSP35858 605 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 HTRA3P83110 453 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 CRMP1Q14194 572 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 ANKRD54Q6NXT1 300 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 MTFR2Q6P444 385 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 FIGNL1Q6PIW4 674 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 PXKQ7Z7A4 578 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 ADGRD2Q7Z7M1 963 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 RANBP3LQ86VV4 465 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-233ENST00000642021 OR11H4Q8NGC9 324 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 LCN9Q8WX39 176 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 MS4A3Q96HJ5 214 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 HYLS1Q96M11 299 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 NDC1Q9BTX1 674 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 SYNDIG1Q9H7V2 258 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 ERVMER34-1Q9H9K5 563 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 USP36Q9P275 1121 aaKnown RBP12.8□□□□□ -0.36
PHGDH-233ENST00000642021 SZT2Q5T011 3432 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 A0A1W2PQU0 124 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 CTSVO60911 334 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 LDB3O75112 727 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 SAGP10523 405 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-233ENST00000642021 PYCR1P32322 319 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 SHC2P98077 582 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 SGCGQ13326 291 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 ACSM3Q53FZ2 586 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 LYPD4Q6UWN0 246 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 ZAR1Q86SH2 424 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 ARL14Q8N4G2 192 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 GHSRQ92847 366 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 KCTD12Q96CX2 325 aaKnown RBP12.8□□□□□ -0.36
PHGDH-233ENST00000642021 SCMH1Q96GD3 660 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 MED28Q9H204 178 aa12.8□□□□□ -0.36
PHGDH-233ENST00000642021 ZFP64Q9NPA5 681 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms