RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 Q6ZS92 163 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 RRM2BQ7LG56 351 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 ZDHHC21Q8IVQ6 265 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 CLIP4Q8N3C7 705 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 OR10Q1Q8NGQ4 319 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 ST8SIA1Q92185 356 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 ZBTB8AQ96BR9 441 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 SDCCAG3Q96C92 435 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 WBP1Q96G27 269 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 ARHGDIGQ99819 225 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 PIGQQ9BRB3 760 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 HES7Q9BYE0 225 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 TTTY12Q9BZ98 90 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 NUP214P35658 2090 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-218ENST00000641491 PCSK5Q92824 1860 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 ELOA3DA6NLF2 546 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-218ENST00000641491 CPSF4LA6NMK7 179 aaKnown RBP11.8□□□□□ -0.52
PHGDH-218ENST00000641491 GJE1A6NN92 205 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 hCG_2039718K7EN88 272 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 ADAMDEC1O15204 470 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 TPST1O60507 370 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 FMO6PO60774 539 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 FKBP6O75344 327 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 TRIM3O75382 744 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-218ENST00000641491 E2F6O75461 281 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 CXCR1P25024 350 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 SRD5A2P31213 254 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 RFC3P40938 356 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 QPRTQ15274 297 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 NRF1Q16656 503 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 LINC00303Q3SY05 128 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 ELOA3BQ3SY89 546 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 SLC6A19Q695T7 634 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 POMZP3Q6PJE2 187 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 APOOLQ6UXV4 268 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 FAM109AQ8N4B1 249 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 PIK3C3Q8NEB9 887 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 ELOA3Q8NG57 546 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 OR2M3Q8NG83 312 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 PHF10Q8WUB8 498 aaKnown RBP11.8□□□□□ -0.52
PHGDH-218ENST00000641491 DNAJA4Q8WW22 397 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-218ENST00000641491 C1GALT1C1Q96EU7 318 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 PRRC1Q96M27 445 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 SFXN2Q96NB2 322 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 GNRHR2Q96P88 292 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 AGPAT4Q9NRZ5 378 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 QPCTLQ9NXS2 382 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 KCNE5Q9UJ90 142 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 TMCC3Q9ULS5 477 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 AP4S1Q9Y587 144 aa11.8□□□□□ -0.52
PHGDH-218ENST00000641491 IGLV3-32A0A0A0MS00 114 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 A0A0G2JMM0 328 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 A0A1W2PPB8 328 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 A0A1W2PRS3 328 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 TRAPPC13A5PLN9 417 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 KIR3DP1A8MWS1 328 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 HNRNPRO43390 633 aaKnown RBP11.79□□□□□ -0.52
PHGDH-218ENST00000641491 DEAF1O75398 565 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-218ENST00000641491 GCM2O75603 506 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-218ENST00000641491 CST1P01037 141 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 PNMTP11086 282 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 RHCEP18577 417 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 TNFRSF1BP20333 461 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 GTF2E2P29084 291 aaKnown RBP11.79□□□□□ -0.52
PHGDH-218ENST00000641491 SLC7A1P30825 629 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 POLR2HP52434 150 aaKnown RBP11.79□□□□□ -0.52
PHGDH-218ENST00000641491 ST3GAL3Q11203 375 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 MERTKQ12866 999 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 FOXD4Q12950 439 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-218ENST00000641491 SLC10A1Q14973 349 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 TAF11Q15544 211 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 GLIPR1L2Q4G1C9 344 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 ALG10BQ5I7T1 473 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 FGD3Q5JSP0 725 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 FNDC7Q5VTL7 733 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 AP1ARQ63HQ0 302 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 GRINAQ7Z429 371 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 RBMXL3Q8N7X1 1067 aaKnown RBP11.79□□□□□ -0.52
PHGDH-218ENST00000641491 GPR32P1Q8NGA4 272 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 OR6T1Q8NGN1 323 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 CANT1Q8WVQ1 401 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 UTP4Q969X6 686 aaKnown RBP11.79□□□□□ -0.52
PHGDH-218ENST00000641491 PIP5K1AQ99755 562 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 CHID1Q9BWS9 393 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 REEP1Q9H902 201 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 CTPS2Q9NRF8 586 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 MED17Q9NVC6 651 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 LUZP4Q9P127 313 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 FBXL2Q9UKC9 423 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 RPH3AQ9Y2J0 694 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-218ENST00000641491 CSAG2Q9Y5P2 127 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 ENPP4Q9Y6X5 453 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 MGAQ8IWI9 3026 aa11.79□□□□□ -0.52
PHGDH-218ENST00000641491 TCRBV3S1A0A5B6 114 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 TTLL8A6PVC2 850 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 B8ZZF3 427 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 LINC01387J3KSC0 135 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 OR5F1O95221 314 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 BAG2O95816 211 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 PDGFAP04085 211 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms