RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ZNF141Q15928 474 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 METTL27Q8N6F8 245 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-211ENST00000641213 ARIH2OSQ8N7S6 290 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 LSMEM1Q8N8F7 131 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 GALNT6Q8NCL4 622 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 OR51A7Q8NH64 312 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 ADAMTS18Q8TE60 1221 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 PTP4A1Q93096 173 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 MMABQ96EY8 250 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-211ENST00000641213 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-211ENST00000641213 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-211ENST00000641213 PLCL2Q9UPR0 1127 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 SYNDIG1LA6NDD5 238 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 C12orf71A8MTZ7 269 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 NPIPB9F8W1W9 429 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 HCN1O60741 890 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 NGFRP08138 427 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 CT45A8P0DMV1 189 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 CT45A9P0DMV2 189 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 PAICSP22234 425 aaKnown RBP15.74■□□□□ 0.11
PHGDH-211ENST00000641213 MLLT3P42568 568 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-211ENST00000641213 DBPQ10586 325 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-211ENST00000641213 KRR1Q13601 381 aaKnown RBP15.74■□□□□ 0.11
PHGDH-211ENST00000641213 ZNF79Q15937 498 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 CT45A2Q5DJT8 189 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 ZMAT1Q5H9K5 638 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 ALG10BQ5I7T1 473 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 GDPD3Q7L5L3 318 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 ACBD7Q8N6N7 88 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 SLC37A3Q8NCC5 494 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 KISS1RQ969F8 398 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-211ENST00000641213 ITPKCQ96DU7 683 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 DCLRE1CQ96SD1 692 aaKnown RBP15.74■□□□□ 0.11
PHGDH-211ENST00000641213 TMED9Q9BVK6 235 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 MIXL1Q9H2W2 232 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 ISG20L2Q9H9L3 353 aaKnown RBP15.74■□□□□ 0.11
PHGDH-211ENST00000641213 TBC1D17Q9HA65 648 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 Q9N2J8 555 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 ABCB9Q9NP78 766 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 IRAK4Q9NWZ3 460 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 MUTYHQ9UIF7 546 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 ERVK-19Q9WJR5 959 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 TMEM184BQ9Y519 407 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-211ENST00000641213 ABCA7Q8IZY2 2146 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 MPDZO75970 2070 aa15.73■□□□□ 0.11
PHGDH-211ENST00000641213 IGHV5-51A0A0C4DH38 117 aa15.73■□□□□ 0.11
PHGDH-211ENST00000641213 SMIM30A4D0T7 59 aa15.73■□□□□ 0.11
PHGDH-211ENST00000641213 PRR23D1E9PI22 279 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-211ENST00000641213 PRR23D2P0DMB1 279 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-211ENST00000641213 RBM34P42696 430 aaKnown RBP15.73■□□□□ 0.11
PHGDH-211ENST00000641213 FNTBP49356 437 aa15.73■□□□□ 0.11
PHGDH-211ENST00000641213 PPM1FP49593 454 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-211ENST00000641213 NNATQ16517 81 aa15.73■□□□□ 0.11
PHGDH-211ENST00000641213 ZNF362Q5T0B9 420 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-211ENST00000641213 FCRLBQ6BAA4 426 aa15.73■□□□□ 0.11
PHGDH-211ENST00000641213 VASNQ6EMK4 673 aa15.73■□□□□ 0.11
PHGDH-211ENST00000641213 LINC00114Q6XXX2 140 aa15.73■□□□□ 0.11
PHGDH-211ENST00000641213 KLBQ86Z14 1044 aa15.73■□□□□ 0.11
PHGDH-211ENST00000641213 OR8H2Q8N162 312 aa15.73■□□□□ 0.11
PHGDH-211ENST00000641213 TMEM99Q8N816 258 aa15.73■□□□□ 0.11
PHGDH-211ENST00000641213 C16orf52Q8NHV5 167 aa15.73■□□□□ 0.11
PHGDH-211ENST00000641213 TGM7Q96PF1 710 aa15.73■□□□□ 0.11
PHGDH-211ENST00000641213 CHRDQ9H2X0 955 aa15.73■□□□□ 0.11
PHGDH-211ENST00000641213 SOHLH2Q9NX45 425 aa15.73■□□□□ 0.11
PHGDH-211ENST00000641213 A0A1W2PQL4 384 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-211ENST00000641213 AQP9O43315 295 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 PGDP52209 483 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 ATP12AP54707 1039 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 FUT7Q11130 342 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 FHL1Q13642 323 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 KLHL12Q53G59 568 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 ARMC4Q5T2S8 1044 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 DESI1Q6ICB0 168 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 OAFQ86UD1 273 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 C17orf82Q86X59 251 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-211ENST00000641213 GATAD2AQ86YP4 633 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 OR51Q1Q8NH59 317 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 SLC35B4Q969S0 331 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 TNFRSF13CQ96RJ3 184 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 TIMP4Q99727 224 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 G6PC3Q9BUM1 346 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 HDHD5Q9BXW7 423 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 SPRTNQ9H040 489 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-211ENST00000641213 OR10A5Q9H207 317 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 LRIT1Q9P2V4 623 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-211ENST00000641213 CCDC182A6NF36 153 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 GABRPO00591 440 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 ZNF749O43361 778 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 PPP1R3DO95685 299 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 HLA-DPB1P04440 258 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 HSD17B7P56937 341 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 DEFB133Q30KQ1 61 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 CCBE1Q6UXH8 406 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-211ENST00000641213 ZNF550Q7Z398 422 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 CADM2Q8N3J6 435 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 BCORP1Q8N888 145 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 ATP6V1C2Q8NEY4 427 aa15.72■□□□□ 0.11
PHGDH-211ENST00000641213 ZNF578Q96N58 590 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-211ENST00000641213 TEAD3Q99594 435 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms