RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 WDR55Q9H6Y2 383 aaPredicted RBP22.56■■□□□ 1.2
VEGFA-232ENST00000640653 MANSC1Q9H8J5 431 aa22.56■■□□□ 1.2
VEGFA-232ENST00000640653 PLEKHF2Q9H8W4 249 aa22.56■■□□□ 1.2
VEGFA-232ENST00000640653 FANCFQ9NPI8 374 aa22.56■■□□□ 1.2
VEGFA-232ENST00000640653 KLHL28Q9NXS3 571 aa22.56■■□□□ 1.2
VEGFA-232ENST00000640653 WDR45Q9Y484 360 aa22.56■■□□□ 1.2
VEGFA-232ENST00000640653 NUP214P35658 2090 aaPredicted RBP22.56■■□□□ 1.2
VEGFA-232ENST00000640653 GOLGA8QA0A0J9YX86 632 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 GOLGA8OA6NCC3 632 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 GOLGA8NF8WBI6 632 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 KIAA0513O60268 411 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 UGT2B17O75795 530 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 CYP7B1O75881 506 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 CSTAP01040 98 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 SHC1P29353 583 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 CCKARP32238 428 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 KEAP1Q14145 624 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 QPRTQ15274 297 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 ZNF239Q16600 458 aaKnown RBP22.55■■□□□ 1.2
VEGFA-232ENST00000640653 EXOC3L2Q2M3D2 409 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 TMEM176BQ3YBM2 270 aaPredicted RBP22.55■■□□□ 1.2
VEGFA-232ENST00000640653 SLC25A53Q5H9E4 307 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 RAB8BQ92930 207 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 PANX1Q96RD7 426 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 KCNE5Q9UJ90 142 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 GPR45Q9Y5Y3 372 aa22.55■■□□□ 1.2
VEGFA-232ENST00000640653 EFNA2O43921 213 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 NTN1O95631 604 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 PGRP06401 933 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 HPCAP84074 193 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 SKP2Q13309 424 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 NXNQ6DKJ4 435 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 OLIG3Q7RTU3 272 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 STK32CQ86UX6 486 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 GLB1L3Q8NCI6 653 aaPredicted RBP22.54■■□□□ 1.2
VEGFA-232ENST00000640653 ATP6V1C2Q8NEY4 427 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 ZFP90Q8TF47 636 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 ROPN1LQ96C74 230 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 MBD6Q96DN6 1003 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 ALPK1Q96QP1 1244 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 OR52E6Q96RD3 313 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 THUMPD3Q9BV44 507 aaKnown RBP22.54■■□□□ 1.2
VEGFA-232ENST00000640653 KLHL4Q9C0H6 718 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 SLC35A3Q9Y2D2 325 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 MPDZO75970 2070 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 CELSR1Q9NYQ6 3014 aa22.54■■□□□ 1.2
VEGFA-232ENST00000640653 CCDC154A6NI56 674 aa22.53■■□□□ 1.2
VEGFA-232ENST00000640653 ETV2O00321 342 aaPredicted RBP22.53■■□□□ 1.2
VEGFA-232ENST00000640653 IL12AP29459 219 aa22.53■■□□□ 1.2
VEGFA-232ENST00000640653 SLC7A1P30825 629 aa22.53■■□□□ 1.2
VEGFA-232ENST00000640653 ANXA11P50995 505 aaKnown RBP22.53■■□□□ 1.2
VEGFA-232ENST00000640653 TXNL4AP83876 142 aaKnown RBP22.53■■□□□ 1.2
VEGFA-232ENST00000640653 RNPS1Q15287 305 aaKnown RBP22.53■■□□□ 1.2
VEGFA-232ENST00000640653 TYW3Q6IPR3 259 aaKnown RBP22.53■■□□□ 1.2
VEGFA-232ENST00000640653 ZNF619Q8N2I2 560 aa22.53■■□□□ 1.2
VEGFA-232ENST00000640653 RNF128Q8TEB7 428 aa22.53■■□□□ 1.2
VEGFA-232ENST00000640653 TMEM234Q8WY98 164 aa22.53■■□□□ 1.2
VEGFA-232ENST00000640653 ROBO4Q8WZ75 1007 aa22.53■■□□□ 1.2
VEGFA-232ENST00000640653 ST8SIA1Q92185 356 aa22.53■■□□□ 1.2
VEGFA-232ENST00000640653 SAP130Q9H0E3 1048 aa22.53■■□□□ 1.2
VEGFA-232ENST00000640653 SPG11Q96JI7 2443 aa22.53■■□□□ 1.2
VEGFA-232ENST00000640653 CENPVL1A0A0U1RR11 272 aa22.52■■□□□ 1.2
VEGFA-232ENST00000640653 C9JVG2 144 aa22.52■■□□□ 1.2
VEGFA-232ENST00000640653 ATE1O95260 518 aa22.52■■□□□ 1.2
VEGFA-232ENST00000640653 UBTFL6P0CB48 400 aaPredicted RBP22.52■■□□□ 1.2
VEGFA-232ENST00000640653 IDO1P14902 403 aa22.52■■□□□ 1.2
VEGFA-232ENST00000640653 PGCP20142 388 aa22.52■■□□□ 1.2
VEGFA-232ENST00000640653 CRYGSP22914 178 aa22.52■■□□□ 1.2
VEGFA-232ENST00000640653 AGTR1P30556 359 aa22.52■■□□□ 1.2
VEGFA-232ENST00000640653 GPAT3Q53EU6 434 aa22.52■■□□□ 1.2
VEGFA-232ENST00000640653 C3orf33Q6P1S2 294 aa22.52■■□□□ 1.2
VEGFA-232ENST00000640653 BEND4Q6ZU67 534 aa22.52■■□□□ 1.2
VEGFA-232ENST00000640653 SRXN1Q9BYN0 137 aa22.52■■□□□ 1.2
VEGFA-232ENST00000640653 C6orf203Q9P0P8 240 aaPredicted RBP22.52■■□□□ 1.2
VEGFA-232ENST00000640653 DNAJA2O60884 412 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 PPP3CBP16298 524 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 FUT5Q11128 374 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 MAPK14Q16539 360 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 TIGD2Q4W5G0 525 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 PDCD4Q53EL6 469 aaKnown RBP22.51■■□□□ 1.19
VEGFA-232ENST00000640653 TMEM201Q5SNT2 666 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 AP1ARQ63HQ0 302 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 FRRS1Q6ZNA5 592 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 ZNF621Q6ZSS3 439 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 FCRLAQ7L513 359 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 ZNF550Q7Z398 422 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 RNF130Q86XS8 419 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 PIWIL2Q8TC59 973 aaKnown RBP22.51■■□□□ 1.19
VEGFA-232ENST00000640653 MAELQ96JY0 434 aaKnown RBP22.51■■□□□ 1.19
VEGFA-232ENST00000640653 COQ10BQ9H8M1 238 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 GP6Q9HCN6 339 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 SERINC1Q9NRX5 453 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 LIPT1Q9Y234 373 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 F8P00451 2351 aa22.51■■□□□ 1.19
VEGFA-232ENST00000640653 DEFB108AA8MXU0 73 aa22.5■■□□□ 1.19
VEGFA-232ENST00000640653 HMGN4O00479 90 aa22.5■■□□□ 1.19
VEGFA-232ENST00000640653 KLF11O14901 512 aa22.5■■□□□ 1.19
VEGFA-232ENST00000640653 IL6P05231 212 aa22.5■■□□□ 1.19
VEGFA-232ENST00000640653 NID1P14543 1247 aa22.5■■□□□ 1.19
VEGFA-232ENST00000640653 SLC43A2Q8N370 569 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms