RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 TMEM202A6NGA9 273 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 LRRC10BA6NIK2 292 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 C1orf105O95561 183 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 DHRS4L1P0CG22 281 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 PGAM2P15259 253 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 UGT2B10P36537 528 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 ZFP69Q49AA0 526 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 LRFN4Q6PJG9 635 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 FAM111BQ6SJ93 734 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 PET117Q6UWS5 81 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 SLC35F3Q8IY50 421 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 HUS1BQ8NHY5 278 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 AENQ8WTP8 325 aaKnown RBP4.69□□□□□ -1.66
SCN1A-218ENST00000640036 ASB12Q8WXK4 309 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 FUBP1Q96AE4 644 aaKnown RBP4.69□□□□□ -1.66
SCN1A-218ENST00000640036 ZNF285Q96NJ3 590 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 DCLRE1CQ96SD1 692 aaKnown RBP4.69□□□□□ -1.66
SCN1A-218ENST00000640036 FAM234AQ9H0X4 552 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 RXFP3Q9NSD7 469 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 MYO18BQ8IUG5 2567 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 OR6C76A6NM76 312 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 F5H5K5 113 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 I6L893 689 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-218ENST00000640036 PENKP01210 267 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-218ENST00000640036 SLC35E2BP0CK96 405 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 TNFRSF1AP19438 455 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 EPHA1P21709 976 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 CERS1P27544 350 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 ATP5J2P56134 94 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 OR12D2P58182 307 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 CDC20Q12834 499 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 TBRG1Q3YBR2 411 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 TMEM92Q6UXU6 159 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 GOLGA7Q7Z5G4 137 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 OR7G1Q8NGA0 311 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 ALG3Q92685 438 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 LIN37Q96GY3 246 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-218ENST00000640036 CMTM3Q96MX0 182 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 TECTBQ96PL2 329 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 SARGQ9BW04 601 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 C1QTNF2Q9BXJ5 285 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 BARHL1Q9BZE3 327 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 ABCB9Q9NP78 766 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 ZNF224Q9NZL3 707 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 GALPQ9UBC7 116 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 TBC1D29Q9UFV1 150 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 B3GALT1Q9Y5Z6 326 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 A0A075B6Q4 140 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 DAPL1A0PJW8 107 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 C20orf202A1L168 122 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 AQP7O14520 342 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 CTNSO60931 367 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 ZNF883P0CG24 379 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 NDUFB7P17568 137 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 PLA2G5P39877 138 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 OR7E24Q6IFN5 339 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 KLBQ86Z14 1044 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 OR4F6Q8NGB9 312 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 OR6N2Q8NGY6 317 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 NANPQ8TBE9 248 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 CT55Q8WUE5 264 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 BCL7CQ8WUZ0 217 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-218ENST00000640036 PIWIL1Q96J94 861 aaKnown RBP4.69□□□□□ -1.66
SCN1A-218ENST00000640036 CDK15Q96Q40 435 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 PBDC1Q9BVG4 233 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 MYOTQ9UBF9 498 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 NUFIP1Q9UHK0 495 aaKnown RBP4.69□□□□□ -1.66
SCN1A-218ENST00000640036 KIF26BQ2KJY2 2108 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 LNP1A1A4G5 178 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 NRG2O14511 850 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-218ENST00000640036 TGDSO95455 350 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 FADS2O95864 444 aaKnown RBP4.69□□□□□ -1.66
SCN1A-218ENST00000640036 CRHR1P34998 444 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 GRIA1P42261 906 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 VEGFCP49767 419 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 ART1P52961 327 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 PPP2CBP62714 309 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 PPP2CAP67775 309 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 AKIRIN2Q53H80 203 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 CLEC6AQ6EIG7 209 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 TPRA1Q86W33 373 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 GJC3Q8NFK1 279 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 ZNF707Q96C28 371 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-218ENST00000640036 RTP4Q96DX8 246 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 GUCD1Q96NT3 240 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 ALPK1Q96QP1 1244 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 TTYH2Q9BSA4 534 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 POLR2J3Q9H1A7 115 aaKnown RBP4.69□□□□□ -1.66
SCN1A-218ENST00000640036 OR10A4Q9H209 315 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 PLA2G3Q9NZ20 509 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 OR51B4Q9Y5P0 310 aa4.69□□□□□ -1.66
SCN1A-218ENST00000640036 hCG_2014768A0A024R1R8 64 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 CENPBD1B2RD01 187 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 FABP3P05413 133 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 SERPINA7P05543 415 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 PAX7P23759 505 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 SERPINF1P36955 418 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 BCL6P41182 706 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 PTGR1Q14914 329 aa4.68□□□□□ -1.66
SCN1A-218ENST00000640036 RAB11BQ15907 218 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms