RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 MMP11P24347 488 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 ACRV1P26436 265 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 CSF2RBP32927 897 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 NPBWR1P48145 328 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 OR10A3P58181 314 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 HBA1P69905 142 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 OR2F1Q13607 317 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 PDE7AQ13946 482 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 ZNF805Q5CZA5 627 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 ZNF613Q6PF04 617 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 ANGPTL8Q6UXH0 198 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 CXXC5Q7LFL8 322 aaKnown RBP11.19□□□□□ -0.62
CAPN3-221ENST00000638141 TWSG1Q9GZX9 223 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 AUNIPQ9H7T9 357 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 BPIFA1Q9NP55 256 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 TMEM138Q9NPI0 162 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 SMCO4Q9NRQ5 59 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 PPP4R1LQ9P1A2 415 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 OR14I1A6ND48 311 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 NPIPB9F8W1W9 429 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 BCL2L11O43521 198 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 PLPP2O43688 288 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 EPHX1P07099 455 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 CD63P08962 238 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 ANXA4P09525 319 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-221ENST00000638141 ZNF35P13682 527 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 ZNF44P15621 663 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 HTR1FP30939 366 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 TIA1P31483 386 aaKnown RBP eCLIP11.18□□□□□ -0.62
CAPN3-221ENST00000638141 HTR5AP47898 357 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 RAE1P78406 368 aaKnown RBP11.18□□□□□ -0.62
CAPN3-221ENST00000638141 SEMG2Q02383 582 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 FABP9Q0Z7S8 132 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 DDX39BQ13838 428 aaKnown RBP11.18□□□□□ -0.62
CAPN3-221ENST00000638141 RBMS2Q15434 407 aaKnown RBP11.18□□□□□ -0.62
CAPN3-221ENST00000638141 ZNF791Q3KP31 576 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-221ENST00000638141 ATP13A5Q4VNC0 1218 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 UBE2NLQ5JXB2 153 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 KLHDC8AQ8IYD2 350 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 POMGNT2Q8NAT1 580 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 GPR32P1Q8NGA4 272 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 RNASE11Q8TAA1 199 aaKnown RBP11.18□□□□□ -0.62
CAPN3-221ENST00000638141 OR1F2PQ96R84 312 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 KLHL9Q9P2J3 617 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 MRPL42Q9Y6G3 142 aaKnown RBP11.18□□□□□ -0.62
CAPN3-221ENST00000638141 PIKFYVEQ9Y2I7 2098 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 GSAPA4D1B5 854 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 B4GALT3O60512 393 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 OAZ2O95190 189 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 SLC34A2O95436 690 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 IFNA10P01566 189 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 ZNF8P17098 575 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-221ENST00000638141 BDKRB2P30411 391 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 RGRP47804 291 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 NRG3P56975 720 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 CHIT1Q13231 466 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 SLC25A35Q3KQZ1 300 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 TIGD5Q53EQ6 642 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 RNASE12Q5GAN4 147 aaKnown RBP11.18□□□□□ -0.62
CAPN3-221ENST00000638141 ATXN7L2Q5T6C5 722 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-221ENST00000638141 GRHL2Q6ISB3 625 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 JMJD6Q6NYC1 403 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-221ENST00000638141 APOOLQ6UXV4 268 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 UBE2R2Q712K3 238 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-221ENST00000638141 GPRC5AQ8NFJ5 357 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 OR1S2Q8NGQ3 325 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 BRIX1Q8TDN6 353 aaKnown RBP11.18□□□□□ -0.62
CAPN3-221ENST00000638141 ASZ1Q8WWH4 475 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 ART5Q96L15 291 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 MTERF1Q99551 399 aaKnown RBP11.18□□□□□ -0.62
CAPN3-221ENST00000638141 WDR77Q9BQA1 342 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-221ENST00000638141 GINS4Q9BRT9 223 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 TEX101Q9BY14 249 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 TLNRD1Q9H1K6 362 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 SAGE1Q9NXZ1 904 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 IRAK3Q9Y616 596 aa11.18□□□□□ -0.62
CAPN3-221ENST00000638141 A0A1B0GV90 55 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 KANTRA0A1W2PQU2 76 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 M0QZQ0 153 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 TGM5O43548 720 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 PGFP49763 221 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 TAS2R43P59537 309 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 RAB2AP61019 212 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 RAB33AQ14088 237 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 FAM110CQ1W6H9 321 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 LINC00303Q3SY05 128 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 CXorf57Q6NSI4 855 aaKnown RBP11.17□□□□□ -0.62
CAPN3-221ENST00000638141 TSSK4Q6SA08 328 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 MBOAT1Q6ZNC8 495 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 NUDT18Q6ZVK8 323 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 DCUN1D3Q8IWE4 304 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 OR5M1Q8NGP8 315 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 STK35Q8TDR2 534 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 ARL11Q969Q4 196 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 SLC25A28Q96A46 364 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 CNTNAP3BQ96NU0 1288 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 OCSTAMPQ9BR26 566 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 ADAT1Q9BUB4 502 aaKnown RBP11.17□□□□□ -0.62
CAPN3-221ENST00000638141 CFHR5Q9BXR6 569 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 TEX12Q9BXU0 123 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms