RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 FABP5Q01469 135 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 DBPQ10586 325 aaPredicted RBP19.84■□□□□ 0.77
CLN6-224ENST00000638076 FUT7Q11130 342 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 MEPCEQ7L2J0 689 aaKnown RBP19.84■□□□□ 0.77
CLN6-224ENST00000638076 CADM2Q8N3J6 435 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 LSMEM1Q8N8F7 131 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 SPRYD4Q8WW59 207 aaPredicted RBP19.84■□□□□ 0.77
CLN6-224ENST00000638076 G6PC3Q9BUM1 346 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 ZNF426Q9BUY5 554 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 HCAR1Q9BXC0 346 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 UCKL1Q9NWZ5 548 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 LRIT1Q9P2V4 623 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 MAU2Q9Y6X3 613 aa19.84■□□□□ 0.77
CLN6-224ENST00000638076 FAM86C2PA6NEL3 165 aa19.83■□□□□ 0.76
CLN6-224ENST00000638076 LOC110117498-PIK3R3F6TDL0 507 aa19.83■□□□□ 0.76
CLN6-224ENST00000638076 NPIPB9F8W1W9 429 aa19.83■□□□□ 0.76
CLN6-224ENST00000638076 PTP4A3O75365 173 aa19.83■□□□□ 0.76
CLN6-224ENST00000638076 CD1CP29017 333 aa19.83■□□□□ 0.76
CLN6-224ENST00000638076 PRPF38BQ5VTL8 546 aaKnown RBP19.83■□□□□ 0.76
CLN6-224ENST00000638076 GATAD2AQ86YP4 633 aa19.83■□□□□ 0.76
CLN6-224ENST00000638076 SP140LQ9H930 580 aa19.83■□□□□ 0.76
CLN6-224ENST00000638076 CMC2Q9NRP2 79 aa19.83■□□□□ 0.76
CLN6-224ENST00000638076 J3QRE1 110 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 AKAP8O43823 692 aaKnown RBP19.82■□□□□ 0.76
CLN6-224ENST00000638076 HCN1O60741 890 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 SDC2P34741 201 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 ATP12AP54707 1039 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 NXPH1P58417 271 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 HNRNPA0Q13151 305 aaKnown RBP19.82■□□□□ 0.76
CLN6-224ENST00000638076 KCNAB1Q14722 419 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 TBC1D25Q3MII6 688 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 C14orf28Q4W4Y0 310 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 KLHL12Q53G59 568 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 FCRLBQ6BAA4 426 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 BCORP1Q8N888 145 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 SYT14Q8NB59 555 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 OR52N1Q8NH53 320 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 ZNF578Q96N58 590 aaPredicted RBP19.82■□□□□ 0.76
CLN6-224ENST00000638076 SDHCQ99643 169 aaPredicted RBP19.82■□□□□ 0.76
CLN6-224ENST00000638076 JAM3Q9BX67 310 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 IQCMA0A1B0GVH7 501 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 RHPN2P1A8MT19 583 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 CELP19835 753 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 CSNK1EP49674 416 aaKnown RBP19.82■□□□□ 0.76
CLN6-224ENST00000638076 NDUFAF6Q330K2 333 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 OGFOD3Q6PK18 319 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 ZNF550Q7Z398 422 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 OAFQ86UD1 273 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 LAX1Q8IWV1 398 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 CADM3Q8N126 398 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 ASB15Q8WXK1 588 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 HTRA1Q92743 480 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 PTP4A1Q93096 173 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 PCED1AQ9H1Q7 454 aa19.82■□□□□ 0.76
CLN6-224ENST00000638076 FITM1A5D6W6 292 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 H0YIG0 161 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 RBM34P42696 430 aaKnown RBP19.81■□□□□ 0.76
CLN6-224ENST00000638076 ACSM1Q08AH1 577 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 AGAP7PQ5VUJ5 663 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 CD200R1LQ6Q8B3 271 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 ZNF615Q8N8J6 731 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 SLC37A3Q8NCC5 494 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 OR4C3Q8NH37 302 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 ZDHHC12Q96GR4 267 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 TNFRSF13CQ96RJ3 184 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 GSTK1Q9Y2Q3 226 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 C12orf71A8MTZ7 269 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 PRR23D1E9PI22 279 aaPredicted RBP19.81■□□□□ 0.76
CLN6-224ENST00000638076 GNB5O14775 395 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 SNX4O95219 450 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 PRR23D2P0DMB1 279 aaPredicted RBP19.81■□□□□ 0.76
CLN6-224ENST00000638076 SLC9A3P48764 834 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 PSPHP78330 225 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 CRYZQ08257 329 aaKnown RBP19.81■□□□□ 0.76
CLN6-224ENST00000638076 CDC20Q12834 499 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 GRM7Q14831 915 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 ULK3Q6PHR2 472 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 ZNF322Q6U7Q0 402 aaPredicted RBP19.81■□□□□ 0.76
CLN6-224ENST00000638076 KIRREL2Q6UWL6 708 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 TMED9Q9BVK6 235 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 RPS6KB2Q9UBS0 482 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 PLEKHB1Q9UF11 243 aaPredicted RBP19.81■□□□□ 0.76
CLN6-224ENST00000638076 EPHA6Q9UF33 1036 aa19.81■□□□□ 0.76
CLN6-224ENST00000638076 CLPSP04118 112 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 FGF9P31371 208 aaPredicted RBP19.8■□□□□ 0.76
CLN6-224ENST00000638076 PSMD4P55036 377 aaKnown RBP19.8■□□□□ 0.76
CLN6-224ENST00000638076 LINC00114Q6XXX2 140 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 KLBQ86Z14 1044 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 ACBD7Q8N6N7 88 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 OR4C6Q8NH72 309 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 KISS1RQ969F8 398 aaPredicted RBP19.8■□□□□ 0.76
CLN6-224ENST00000638076 SLC35B4Q969S0 331 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 TBX5Q99593 518 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 MED18Q9BUE0 208 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 YIPF2Q9BWQ6 316 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 ISG20L2Q9H9L3 353 aaKnown RBP19.8■□□□□ 0.76
CLN6-224ENST00000638076 TBC1D17Q9HA65 648 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 CPNE5Q9HCH3 593 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 CMAHPQ9Y471 501 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 RNF215Q9Y6U7 377 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms