RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 NKAIN3Q8N8D7 197 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 CT45A3Q8NHU0 189 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 SGCZQ96LD1 299 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 SIDT1Q9NXL6 827 aaKnown RBP14.27□□□□□ -0.13
UBE3A-227ENST00000638011 LOC102723532A0A0G2JNH3 316 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 CXorf49A8MYA2 514 aaPredicted RBP14.26□□□□□ -0.13
UBE3A-227ENST00000638011 TMEM127O75204 238 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 SLC14A1Q13336 389 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 SFRP5Q5T4F7 317 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 ARHGAP40Q5TG30 622 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 RNF24Q9Y225 148 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 DHRS4L1P0CG22 281 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 ZNF133P52736 654 aaPredicted RBP14.26□□□□□ -0.13
UBE3A-227ENST00000638011 CD81P60033 236 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 TCTE1Q5JU00 501 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 SLC2A13Q96QE2 648 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 VAMP8Q9BV40 100 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 BABAM2Q9NXR7 383 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 ADAM29Q9UKF5 820 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 UPK3BL1B0FP48 263 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 UPK3BL2E5RIL1 263 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 CAPNS1P04632 268 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 ANXA7P20073 488 aaKnown RBP14.26□□□□□ -0.13
UBE3A-227ENST00000638011 SDSLQ96GA7 329 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 SDR39U1Q9NRG7 319 aaPredicted RBP14.26□□□□□ -0.13
UBE3A-227ENST00000638011 ANKRD36A6QL64 1941 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 XKRY2A2RUG3 117 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 HLA-DMAP28067 261 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 KCNQ1P51787 676 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 P2RY14Q15391 338 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 GTDC1Q4AE62 458 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 SLC35F2Q8IXU6 374 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 GPR26Q8NDV2 337 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 RNF11Q9Y3C5 154 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 A0A1W2PPK0 400 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 BLACEA4D250 179 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 ZNF207O43670 478 aaKnown RBP14.26□□□□□ -0.13
UBE3A-227ENST00000638011 SELENOWP63302 87 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 HSF1Q00613 529 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 NRSN1Q8IZ57 195 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 OR8D2Q9GZM6 311 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 FXYD4P59646 89 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 CHRNEQ04844 493 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 GRM2Q14416 872 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 TPGS2Q68CL5 300 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 FAM124AQ86V42 546 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 MS4A4EQ96PG1 132 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 NKX3-1Q99801 234 aaPredicted RBP14.26□□□□□ -0.13
UBE3A-227ENST00000638011 HINT2Q9BX68 163 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 ERVMER34-1Q9H9K5 563 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 TAC3Q9UHF0 121 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 PDHXO00330 501 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 TACR3P29371 465 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 SUOXP51687 545 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 ADARB1P78563 741 aaKnown RBP14.26□□□□□ -0.13
UBE3A-227ENST00000638011 FOXK1P85037 733 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 TOLLIPQ9H0E2 274 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 HHLA2Q9UM44 414 aa14.26□□□□□ -0.13
UBE3A-227ENST00000638011 OC90Q02509 493 aaPredicted RBP14.25□□□□□ -0.13
UBE3A-227ENST00000638011 CMTM2Q8TAZ6 248 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 PRRC1Q96M27 445 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 SALL4Q9UJQ4 1053 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 ZNF281Q9Y2X9 895 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 STRAPQ9Y3F4 350 aaKnown RBP14.25□□□□□ -0.13
UBE3A-227ENST00000638011 SPATA31A1Q5TZJ5 1347 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.25□□□□□ -0.13
UBE3A-227ENST00000638011 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.25□□□□□ -0.13
UBE3A-227ENST00000638011 GIPP09681 153 aaPredicted RBP14.25□□□□□ -0.13
UBE3A-227ENST00000638011 CPOXP36551 454 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 RFX2P48378 723 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 ACSM1Q08AH1 577 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 PLBD1Q6P4A8 553 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 ALKAL2Q6UX46 152 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 ZGRF1Q86YA3 2104 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 TFGQ92734 400 aaPredicted RBP14.25□□□□□ -0.13
UBE3A-227ENST00000638011 PKMYT1Q99640 499 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 PCBD1P61457 104 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 CATR1Q13166 79 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 ZNF239Q16600 458 aaKnown RBP14.25□□□□□ -0.13
UBE3A-227ENST00000638011 ABHD15Q6UXT9 468 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 C1orf127Q8N9H9 656 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 SLC2A6Q9UGQ3 507 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 YARS2Q9Y2Z4 477 aaKnown RBP14.25□□□□□ -0.13
UBE3A-227ENST00000638011 H7BY64 318 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 FBXO24O75426 580 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 THBS1P07996 1170 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 ZNF852Q6ZMS4 543 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 OR52N2Q8NGI0 321 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 OR8U1Q8NH10 309 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 TOMM40LQ969M1 308 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 INTS14Q96SY0 518 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 NUDT9Q9BW91 350 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 CLCNKAP51800 687 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 TPRG1Q6ZUI0 275 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 MVB12BQ9H7P6 319 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 TAF9BQ9HBM6 251 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 RASD1Q9Y272 281 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 SMIM28A0A1B0GU29 152 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 TMEM235A6NFC5 223 aa14.25□□□□□ -0.13
UBE3A-227ENST00000638011 SF3B4Q15427 424 aaKnown RBP eCLIP14.25□□□□□ -0.131e-6■■■□□ 15.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms