RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 ARSGQ96EG1 525 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 ZC3HAV1LQ96H79 300 aaKnown RBP16.96■□□□□ 0.31
CLN6-221ENST00000637494 SLC35A5Q9BS91 424 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 ZNF350Q9GZX5 532 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 LAT2Q9GZY6 243 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 C6orf203Q9P0P8 240 aaPredicted RBP16.96■□□□□ 0.31
CLN6-221ENST00000637494 BTNL2Q9UIR0 455 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 FCMRO60667 390 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 PRKD3O94806 890 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 KITP10721 976 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 CASP9P55211 416 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 NME5P56597 212 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 TXNL4AP83876 142 aaKnown RBP16.95■□□□□ 0.3
CLN6-221ENST00000637494 TOMM34Q15785 309 aaPredicted RBP16.95■□□□□ 0.3
CLN6-221ENST00000637494 GPAT3Q53EU6 434 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 SAXO2Q658L1 398 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 NXNQ6DKJ4 435 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 HEPHL1Q6MZM0 1159 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 C3orf33Q6P1S2 294 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 TNFAIP8L2Q6P589 184 aaPredicted RBP16.95■□□□□ 0.3
CLN6-221ENST00000637494 ZNF550Q7Z398 422 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 ROBO4Q8WZ75 1007 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 ST8SIA1Q92185 356 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 NEURL3Q96EH8 262 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 PANX1Q96RD7 426 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 KLHDC3Q9BQ90 382 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 TACO1Q9BSH4 297 aaKnown RBP16.95■□□□□ 0.3
CLN6-221ENST00000637494 THUMPD3Q9BV44 507 aaKnown RBP16.95■□□□□ 0.3
CLN6-221ENST00000637494 SERHL2Q9H4I8 314 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 C12orf49Q9H741 205 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 AIG1Q9NVV5 245 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 SLC35A3Q9Y2D2 325 aa16.95■□□□□ 0.3
CLN6-221ENST00000637494 MPDZO75970 2070 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 SDHDO14521 159 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 ANKRD28O15084 1053 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 SCN2BO60939 215 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 UGT2B17O75795 530 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 GUSBP08236 651 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 UBTFL6P0CB48 400 aaPredicted RBP16.94■□□□□ 0.3
CLN6-221ENST00000637494 AGTR1P30556 359 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 SLC18A1P54219 525 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 MAGOHP61326 146 aaKnown RBP16.94■□□□□ 0.3
CLN6-221ENST00000637494 SLC25A53Q5H9E4 307 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 ANKRD34AQ69YU3 496 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 FCRLAQ7L513 359 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 SLC43A2Q8N370 569 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 GLB1L3Q8NCI6 653 aaPredicted RBP16.94■□□□□ 0.3
CLN6-221ENST00000637494 RNF128Q8TEB7 428 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 RAB8BQ92930 207 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 ROPN1LQ96C74 230 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 CCDC115Q96NT0 180 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 OR52E6Q96RD3 313 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 GP6Q9HCN6 339 aa16.94■□□□□ 0.3
CLN6-221ENST00000637494 BEX4Q9NWD9 120 aaPredicted RBP16.94■□□□□ 0.3
CLN6-221ENST00000637494 SPIN1Q9Y657 262 aaPredicted RBP16.94■□□□□ 0.3
CLN6-221ENST00000637494 F8P00451 2351 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 GOLGA8QA0A0J9YX86 632 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 GOLGA8OA6NCC3 632 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 GOLGA8NF8WBI6 632 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 KIAA0513O60268 411 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 KLK2P20151 261 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 FPR1P21462 350 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 EPHA3P29320 983 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 SHC1P29353 583 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 CCKARP32238 428 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 WDR4P57081 412 aaKnown RBP16.93■□□□□ 0.3
CLN6-221ENST00000637494 UFM1P61960 85 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 PHC1P78364 1004 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 SKP2Q13309 424 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 TIGD2Q4W5G0 525 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 ZNF619Q8N2I2 560 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 ZNF563Q8TA94 476 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 TMUB1Q9BVT8 246 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 MANSC1Q9H8J5 431 aa16.93■□□□□ 0.3
CLN6-221ENST00000637494 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.93■□□□□ 0.3
CLN6-221ENST00000637494 SPG11Q96JI7 2443 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 CCDC154A6NI56 674 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 EFNA2O43921 213 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 SNNO75324 88 aaPredicted RBP16.92■□□□□ 0.3
CLN6-221ENST00000637494 NTN1O95631 604 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 PGRP06401 933 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 ALDOCP09972 364 aaKnown RBP16.92■□□□□ 0.3
CLN6-221ENST00000637494 IDO1P14902 403 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 RAC3P60763 192 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 MERTKQ12866 999 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 TYW3Q6IPR3 259 aaKnown RBP16.92■□□□□ 0.3
CLN6-221ENST00000637494 ZNF621Q6ZSS3 439 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 ABHD3Q8WU67 409 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 PIGTQ969N2 578 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 OR5B2Q96R09 309 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 HDHD5Q9BXW7 423 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 SRXN1Q9BYN0 137 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 OR10A4Q9H209 315 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 WDR55Q9H6Y2 383 aaPredicted RBP16.92■□□□□ 0.3
CLN6-221ENST00000637494 KLHL9Q9P2J3 617 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 KLHL13Q9P2N7 655 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 LIPT1Q9Y234 373 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 GPR52Q9Y2T5 361 aa16.92■□□□□ 0.3
CLN6-221ENST00000637494 DEFB108AA8MXU0 73 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 IL6P05231 212 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms