RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 A0A087WV62 115 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 A0A087WZY1 265 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 A0A0J9YW62 118 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 RAMP1O60894 148 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 SNUPNO95149 360 aaKnown RBP8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 UTS2O95399 124 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 OTCP00480 354 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 PABPC4LP0CB38 370 aaKnown RBP8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 ZNF17P17021 662 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 TSPAN8P19075 237 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 STX2P32856 288 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 PAFAH1B1P43034 410 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 MAGEA4P43358 317 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 NUDT6P53370 316 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 PSMD4P55036 377 aaKnown RBP8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 CASP9P55211 416 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 CDH13P55290 713 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 SCAND1P57086 179 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 C21orf58P58505 322 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 PRR5P85299 388 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 PDSS1Q5T2R2 415 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 CPTPQ5TA50 214 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 AGAP6Q5VW22 663 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 FAM219BQ5XKK7 198 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 CLEC2AQ6UVW9 174 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 TFAP2EQ6VUC0 442 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 RPS27LQ71UM5 84 aaKnown RBP8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 NUFIP2Q7Z417 695 aaKnown RBP8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 TUSC5Q8IXB3 177 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 GTPBP8Q8N3Z3 284 aaPredicted RBP8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 ARIH2OSQ8N7S6 290 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 C1orf162Q8NEQ5 155 aaPredicted RBP8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 C16orf78Q8WTQ4 265 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 SLC9A6Q92581 669 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 BBS4Q96RK4 519 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 NPAS1Q99742 590 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 ERP44Q9BS26 406 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 FAIMQ9NVQ4 179 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 TMCO1Q9UM00 188 aa8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 C19orf53Q9UNZ5 99 aaPredicted RBP8.13□□□□□ -1.11
CACNA1A-236ENST00000637117 SVEP1Q4LDE5 3571 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 GNG14A0A1W2PPG7 69 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 MYO1GB0I1T2 1018 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 SHISA9B4DS77 424 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 KIF2AO00139 706 aaPredicted RBP8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 UPK1AO00322 258 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 UBFD1O14562 309 aaKnown RBP8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 DYNC1I1O14576 645 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 ZSCAN12O43309 604 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 PCDH7O60245 1069 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 LMX1BO60663 402 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 SMIM24O75264 130 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 OR4F21O95013 312 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 JUNP05412 331 aaKnown RBP8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 HSD3B1P14060 373 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 CHN1P15882 459 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 SRD5A1P18405 259 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 FUT4P22083 530 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 ME2P23368 584 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 PSMA4P25789 261 aaKnown RBP8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 GABRA3P34903 492 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 NCBP2P52298 156 aaKnown RBP eCLIP8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 RAE1P78406 368 aaKnown RBP8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 IRX1P78414 480 aaPredicted RBP8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 RUNX1T1Q06455 604 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 ITGADQ13349 1161 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 P2RY6Q15077 328 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 RAB35Q15286 201 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 RNPS1Q15287 305 aaKnown RBP8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 ZNHIT3Q15649 155 aaPredicted RBP8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 GRAMD1BQ3KR37 738 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 TMEM107Q6UX40 140 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 BHLHA15Q7RTS1 189 aaPredicted RBP8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 CCDC25Q86WR0 208 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 CMIPQ8IY22 773 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 LILRA2Q8N149 483 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 C17orf53Q8N3J3 647 aaPredicted RBP8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 PHOSPHO1Q8TCT1 267 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 ABHD3Q8WU67 409 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 ZBTB8AQ96BR9 441 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 REXO5Q96IC2 774 aaKnown RBP8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 RNF145Q96MT1 663 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 CACNG6Q9BXT2 260 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 POTEKPQ9BYX7 375 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 TMEM185BQ9H7F4 350 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 C3orf14Q9HBI5 128 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 ZNF225Q9UK10 706 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 NFU1Q9UMS0 254 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 SAR1BQ9Y6B6 198 aa8.12□□□□□ -1.11
CACNA1A-236ENST00000637117 A0A1W2PRB8 838 aa8.11□□□□□ -1.11
CACNA1A-236ENST00000637117 GXYLT2A0PJZ3 443 aa8.11□□□□□ -1.11
CACNA1A-236ENST00000637117 ZNF814B7Z6K7 855 aa8.11□□□□□ -1.11
CACNA1A-236ENST00000637117 MANBAO00462 879 aa8.11□□□□□ -1.11
CACNA1A-236ENST00000637117 PSPNO60542 156 aa8.11□□□□□ -1.11
CACNA1A-236ENST00000637117 PSMG1O95456 288 aa8.11□□□□□ -1.11
CACNA1A-236ENST00000637117 IGKV1D-16P01601 117 aa8.11□□□□□ -1.11
CACNA1A-236ENST00000637117 KRT6AP02538 564 aa8.11□□□□□ -1.11
CACNA1A-236ENST00000637117 KRT6BP04259 564 aa8.11□□□□□ -1.11
CACNA1A-236ENST00000637117 YES1P07947 543 aa8.11□□□□□ -1.11
CACNA1A-236ENST00000637117 RPS17P08708 135 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms