RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 SLC25A53Q5H9E4 307 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 MRPL2Q5T653 305 aaKnown RBP6.12□□□□□ -1.43
UPF3B-205ENST00000636792 SLC6A19Q695T7 634 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 TIGD3Q6B0B8 471 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 C16orf47Q6ZP98 133 aaPredicted RBP6.12□□□□□ -1.43
UPF3B-205ENST00000636792 MDGA2Q7Z553 956 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 ZAR1Q86SH2 424 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 RBMXL3Q8N7X1 1067 aaKnown RBP6.12□□□□□ -1.43
UPF3B-205ENST00000636792 ZNF614Q8N883 585 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 LSMEM1Q8N8F7 131 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 OR5W2Q8NH69 310 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 B4GALNT2Q8NHY0 566 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 PHOSPHO1Q8TCT1 267 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 OTUB1Q96FW1 271 aaPredicted RBP6.12□□□□□ -1.43
UPF3B-205ENST00000636792 DUS3LQ96G46 650 aaKnown RBP6.12□□□□□ -1.43
UPF3B-205ENST00000636792 MRGPRX4Q96LA9 322 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 SIGLEC12Q96PQ1 595 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 TRIM8Q9BZR9 551 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 OR2B2Q9GZK3 357 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 UBQLN3Q9H347 655 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 ANKRD19PQ9H560 264 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 ZNF703Q9H7S9 590 aaPredicted RBP6.12□□□□□ -1.43
UPF3B-205ENST00000636792 YY1AP1Q9H869 796 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 ZDHHC11Q9H8X9 412 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 LIN28AQ9H9Z2 209 aaKnown RBP6.12□□□□□ -1.43
UPF3B-205ENST00000636792 ACKR4Q9NPB9 350 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 SLC7A8Q9UHI5 535 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 KCNE5Q9UJ90 142 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 PACSIN3Q9UKS6 424 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 ICAM5Q9UMF0 924 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 POMPQ9Y244 141 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 C15orf41Q9Y2V0 281 aa6.12□□□□□ -1.43
UPF3B-205ENST00000636792 SPIN1Q9Y657 262 aaPredicted RBP6.12□□□□□ -1.43
UPF3B-205ENST00000636792 LRRC3CA6NJW4 275 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 MASP2O00187 686 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 AP3D1O14617 1153 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 HCRTR2O43614 444 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 SCO2O43819 266 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 HCN1O60741 890 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 GCM2O75603 506 aaPredicted RBP6.11□□□□□ -1.43
UPF3B-205ENST00000636792 SORBS2O94875 1100 aaKnown RBP6.11□□□□□ -1.43
UPF3B-205ENST00000636792 GLSO94925 669 aaPredicted RBP6.11□□□□□ -1.43
UPF3B-205ENST00000636792 SERPINA1P01009 418 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 C1QCP02747 245 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 IFNW1P05000 195 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 FESP07332 822 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 FAM87AP0C7U9 286 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 FCGR1AP12314 374 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 NQO1P15559 274 aaKnown RBP6.11□□□□□ -1.43
UPF3B-205ENST00000636792 TCN1P20061 433 aaPredicted RBP6.11□□□□□ -1.43
UPF3B-205ENST00000636792 CD247P20963 164 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 MAGEA2P43356 314 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 MEOX1P50221 254 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 CRYBA2P53672 197 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 CASP9P55211 416 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 COPZ1P61923 177 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 ZNF117Q03924 483 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 FOXO1Q12778 655 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 EPS8Q12929 822 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 RAPSNQ13702 412 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 CD226Q15762 336 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 MAPK14Q16539 360 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 FAM98BQ52LJ0 330 aaKnown RBP6.11□□□□□ -1.43
UPF3B-205ENST00000636792 CYBRD1Q53TN4 286 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 RPS26P11Q5JNZ5 115 aaPredicted RBP6.11□□□□□ -1.43
UPF3B-205ENST00000636792 PRAMEF20Q5VT98 475 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 SPINK14Q6IE38 97 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 C3orf33Q6P1S2 294 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 ZFP1Q6P2D0 407 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 ZNF613Q6PF04 617 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 FAM180AQ6UWF9 173 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 ZNF836Q6ZNA1 936 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 FKBP9P1Q75LS8 142 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 PIWIL3Q7Z3Z3 882 aaKnown RBP6.11□□□□□ -1.43
UPF3B-205ENST00000636792 GRINAQ7Z429 371 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 GALNTL5Q7Z4T8 443 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 CYP4Z1Q86W10 505 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 SULF2Q8IWU5 870 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 TEX19Q8NA77 164 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 OR2M3Q8NG83 312 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 OR4K17Q8NGC6 315 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 SLC25A43Q8WUT9 341 aaPredicted RBP6.11□□□□□ -1.43
UPF3B-205ENST00000636792 DNAJA4Q8WW22 397 aaPredicted RBP6.11□□□□□ -1.43
UPF3B-205ENST00000636792 TAMM41Q96BW9 452 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 CCDC124Q96CT7 223 aaKnown RBP6.11□□□□□ -1.43
UPF3B-205ENST00000636792 C1GALT1C1Q96EU7 318 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 FAM46AQ96IP4 442 aaKnown RBP6.11□□□□□ -1.43
UPF3B-205ENST00000636792 PRRC1Q96M27 445 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 ZNF347Q96SE7 839 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 ARHGDIGQ99819 225 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 ZNF559Q9BR84 538 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 PIGQQ9BRB3 760 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 TTTY12Q9BZ98 90 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 TRIM2Q9C040 744 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 PROK2Q9HC23 129 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 AGPAT4Q9NRZ5 378 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 FBXO34Q9NWN3 711 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 PAQR5Q9NXK6 330 aaPredicted RBP6.11□□□□□ -1.43
UPF3B-205ENST00000636792 TAS2R10Q9NYW0 307 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 EGFL7Q9UHF1 273 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms