RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	LEFTY1	O75610	366 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	NCR1	O76036	304 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	IFNA10	P01566	189 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	ELFN1	P0C7U0	828 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	ACP2	P11117	423 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	ZNF8	P17098	575 aa	Predicted RBP	10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	CEBPB	P17676	345 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	PSMB1	P20618	241 aa	Known RBP	10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	PRPS1L1	P21108	318 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	MPG	P29372	298 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	STAT5A	P42229	794 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	SLC1A3	P43003	542 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	SRP9	P49458	86 aa	Known RBP	10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	MECP2	P51608	486 aa	Known RBP	10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	CCR6	P51684	374 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	DLX5	P56178	289 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	C21orf58	P58505	322 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	HMGCS1	Q01581	520 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	CHAF1B	Q13112	559 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	PDZK1IP1	Q13113	114 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	SNTB2	Q13425	540 aa	Known RBP	10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	DHCR24	Q15392	516 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	MANEA	Q5SRI9	462 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	DNLZ	Q5SXM8	178 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	GCNT6	Q5T4J0	391 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	IDNK	Q5T6J7	187 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	ZNF621	Q6ZSS3	439 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	NAA40	Q86UY6	237 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	CBLN2	Q8IUK8	224 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	ZNF561	Q8N587	486 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	NR4A3	Q92570	626 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	PHYHIPL	Q96FC7	376 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	MRGPRX3	Q96LB0	322 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	ABHD1	Q96SE0	405 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	FAIM2	Q9BWQ8	316 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	ELOVL2	Q9NXB9	296 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	TAS2R5	Q9NYW4	299 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	PIKFYVE	Q9Y2I7	2098 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	EDDM13	A0A1B0GTR0	161 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	SERTM1	A2A2V5	107 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	GFY	I3L273	518 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	UGDH	O60701	494 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	CAT	P04040	527 aa	Known RBP	10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	MUC1	P15941	1255 aa	Predicted RBP	10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	CCR7	P32248	378 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	POU3F4	P49335	361 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	PNLIPRP1	P54315	467 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	CXADR	P78310	365 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	LRRC74A	Q0VAA2	488 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	BOP1	Q14137	746 aa	Known RBP	10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	PEA15	Q15121	130 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	C4orf46	Q504U0	113 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	OR5M10	Q6IEU7	315 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	KIAA1211L	Q6NV74	962 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	ZNF765	Q7L2R6	523 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	REC114	Q7Z4M0	266 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	MEIOB	Q8N635	442 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	TCEANC	Q8N8B7	351 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	C15orf54	Q8N8G6	183 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	ZNF485	Q8NCK3	441 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	TMEM185A	Q8NFB2	350 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	SMAP2	Q8WU79	429 aa	Predicted RBP	10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	OR8D1	Q8WZ84	308 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	MTFMT	Q96DP5	389 aa	Known RBP	10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	ZNF354B	Q96LW1	612 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	MS4A4E	Q96PG1	132 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	SPOCK3	Q9BQ16	436 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	DPH2	Q9BQC3	489 aa	Predicted RBP	10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	RERGL	Q9H628	205 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	SFXN1	Q9H9B4	322 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	TPT1P8	Q9HAU6	139 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	PLEKHA1	Q9HB21	404 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	DZANK1	Q9NVP4	752 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	OBP2A	Q9NY56	170 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	ZNF629	Q9UEG4	869 aa	Predicted RBP	10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	KLF15	Q9UIH9	416 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	FZD4	Q9ULV1	537 aa		10.03	□□□□□ -0.8
CHD2-223	ENST00000636306	KIAA1549L	Q6ZVL6	1849 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	TP53BP1	Q12888	1972 aa	Predicted RBP	10.02	□□□□□ -0.81
CHD2-223	ENST00000636306		A0A0D9SG52	128 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306		A0A1B0GV90	55 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	NRG2	O14511	850 aa	Predicted RBP	10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	ARPC5	O15511	151 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	CREBL2	O60519	120 aa	Predicted RBP	10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	SEMA7A	O75326	666 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	GCM2	O75603	506 aa	Predicted RBP	10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	RGS9	O75916	674 aa	Predicted RBP	10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	PRG2	P13727	222 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	HTR2A	P28223	471 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	THBS2	P35442	1172 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	PMEL	P40967	661 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	MNDA	P41218	407 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	CCR9	P51686	369 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	WNT3	P56703	355 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	B4GALNT1	Q00973	533 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	PDGFRL	Q15198	375 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	MPPED2	Q15777	294 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	HENMT1	Q5T8I9	393 aa	Known RBP	10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	ZNF626	Q68DY1	528 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	OR8J2	Q8NGG1	315 aa		10.02	□□□□□ -0.81

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