RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 VASPP50552 380 aaPredicted RBP13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 EIPR1Q53HC9 387 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 ZNF671Q8TAW3 534 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 ST8SIA4Q92187 359 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 MTG2Q9H4K7 406 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 BEX1Q9HBH7 125 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 HAO2Q9NYQ3 351 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 SCML1Q9UN30 329 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 ZNF443Q9Y2A4 671 aaPredicted RBP13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 NTNG1Q9Y2I2 539 aa13.75□□□□□ -0.21
CACNA1A-220ENST00000635988 A0A1B0GTQ1 180 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 OR6C65A6NJZ3 312 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 TOR1AO14656 332 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 TMEM127O75204 238 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 GATBO75879 557 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 HRGP04196 525 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 ALDOBP05062 364 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 TEAD1P28347 426 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 SLC16A1P53985 500 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 STXBP1P61764 594 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 SREBF2Q12772 1141 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 BTN1A1Q13410 526 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 RGS7BPQ6MZT1 257 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 RANBP3LQ86VV4 465 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 MOSPD2Q8NHP6 518 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 ADAMTS15Q8TE58 950 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 THAP4Q8WY91 577 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 ELP4Q96EB1 424 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 ELMOD3Q96FG2 381 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 GPN1Q9HCN4 374 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 HRASLSQ9HDD0 168 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 EQTNQ9NQ60 294 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 MGAT4CQ9UBM8 478 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 PFDN2Q9UHV9 154 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 CCL26Q9Y258 94 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 SLC35A3Q9Y2D2 325 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 IRAK3Q9Y616 596 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 DENND4CQ5VZ89 1909 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 A0A1W2PPV9 198 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 A0A1W2PR48 441 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 CDHR4A6H8M9 788 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 PPM1DO15297 605 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 PRKRAO75569 313 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 ATP1B1P05026 303 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 IFNGR1P15260 489 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 HIST1H1TP22492 207 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 NFYAP23511 347 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 PYCR1P32322 319 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 PTGER1P34995 402 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 OR12D2P58182 307 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 ZNF85Q03923 595 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 PUS10Q3MIT2 529 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 SFRP4Q6FHJ7 346 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 MRM1Q6IN84 353 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 SLC48A1Q6P1K1 146 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 TMCO2Q7Z6W1 182 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 ZBTB44Q8NCP5 570 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 OR4D9Q8NGE8 314 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 ZFPM2Q8WW38 1151 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 PTP4A1Q93096 173 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 LINC00052Q96N35 136 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 HCAR1Q9BXC0 346 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 DPH1Q9BZG8 443 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 CDCP1Q9H5V8 836 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 ADGRL4Q9HBW9 690 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 POLMQ9NP87 494 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 FBXL3Q9UKT7 428 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 ACSL5Q9ULC5 683 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 CEP350Q5VT06 3117 aa13.74□□□□□ -0.21
CACNA1A-220ENST00000635988 TRAPPC13A5PLN9 417 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 RIIAD1A6NNX1 92 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 GABARAPH6UMI1 98 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 B3GALNT1O75752 331 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 WDPCPO95876 746 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 PRNPP04156 253 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 CLTBP09497 229 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 NT5EP21589 574 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 MC3RP41968 323 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 VEGFCP49767 419 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 FOXK2Q01167 660 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 TUSC1Q2TAM9 212 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 HEPHL1Q6MZM0 1159 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 Q6ZTK2 550 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 PRSS45Q7RTY3 260 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 CDK20Q8IZL9 346 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 MEIOBQ8N635 442 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 OR6M1Q8NGM8 313 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 SMPDL3BQ92485 455 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 PHYHIPQ92561 330 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 SGTBQ96EQ0 304 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 MENTQ9BUN1 341 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 CHIAQ9BZP6 476 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 OR51V1Q9H2C8 321 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 RCE1Q9Y256 329 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 RWDD3Q9Y3V2 267 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 ATG4BQ9Y4P1 393 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 PCDHGA9Q9Y5G4 932 aaKnown RBP13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 KIAA1549LQ6ZVL6 1849 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 OGG1O15527 345 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 AIFM1O95831 613 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms