RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 EEF1A1P5Q5VTE0 462 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 METTL21CQ5VZV1 264 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 ESPNLQ6ZVH7 1005 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 GDF7Q7Z4P5 450 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 GGNQ86UU5 652 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 MCEMP1Q8IX19 187 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 PEX5LQ8IYB4 626 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 GCNT2Q8N0V5 402 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 LILRA2Q8N149 483 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 ZNF563Q8TA94 476 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 PMM1Q92871 262 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 ZNF845Q96IR2 970 aaPredicted RBP18.78■□□□□ 0.6
SF1-221ENST00000633899 ENKD1Q9H0I2 346 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.78■□□□□ 0.6
SF1-221ENST00000633899 MCTS1Q9ULC4 181 aaKnown RBP18.78■□□□□ 0.6
SF1-221ENST00000633899 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 A0A1W2PP18 115 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 TNFSF11O14788 317 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 SYNGR4O95473 234 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 DBIP07108 87 aaKnown RBP18.77■□□□□ 0.6
SF1-221ENST00000633899 PRKCAP17252 672 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 PGM1P36871 562 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 MVDP53602 400 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 PAGE3Q5JUK9 113 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 LRIF1Q5T3J3 769 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 CMIPQ8IY22 773 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 ATP6V1C2Q8NEY4 427 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 OR10D3Q8NH80 312 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 OR2V1Q8NHB1 315 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 ST8SIA1Q92185 356 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 FIG4Q92562 907 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 ZG16BQ96DA0 208 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 KLHL15Q96M94 604 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 MRGBPQ9NV56 204 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 LEF1Q9UJU2 399 aaPredicted RBP18.77■□□□□ 0.6
SF1-221ENST00000633899 CORO2BQ9UQ03 480 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 NDUFAF1Q9Y375 327 aa18.77■□□□□ 0.6
SF1-221ENST00000633899 UNC79Q9P2D8 2635 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 AGAP5A6NIR3 686 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 EVPLLA8MZ36 301 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 C5orf58C9J3I9 102 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 RYKP34925 604 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 SLC6A8P48029 635 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 SF3A3Q12874 501 aaKnown RBP eCLIP18.76■□□□□ 0.591e-11■□□□□ 9.6
SF1-221ENST00000633899 FOXF2Q12947 444 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 SELENBP1Q13228 472 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 RGNQ15493 299 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 AP1ARQ63HQ0 302 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 HBMQ6B0K9 141 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 CNEP1R1Q8N9A8 125 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 FAM71CQ8NEG0 241 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 FNDC9Q8TBE3 224 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 CCDC134Q9H6E4 229 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 SLC24A3Q9HC58 644 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 SERINC1Q9NRX5 453 aa18.76■□□□□ 0.59
SF1-221ENST00000633899 FOXD3Q9UJU5 478 aaPredicted RBP18.76■□□□□ 0.59
SF1-221ENST00000633899 CRHP06850 196 aa18.75■□□□□ 0.59
SF1-221ENST00000633899 TFPTP0C1Z6 253 aa18.75■□□□□ 0.59
SF1-221ENST00000633899 UQCRBP14927 111 aa18.75■□□□□ 0.59
SF1-221ENST00000633899 IL11P20809 199 aa18.75■□□□□ 0.59
SF1-221ENST00000633899 SLC7A1P30825 629 aa18.75■□□□□ 0.59
SF1-221ENST00000633899 MDH1P40925 334 aaKnown RBP18.75■□□□□ 0.59
SF1-221ENST00000633899 CPA2P48052 419 aa18.75■□□□□ 0.59
SF1-221ENST00000633899 SLC38A5Q8WUX1 472 aa18.75■□□□□ 0.59
SF1-221ENST00000633899 RNASE6Q93091 150 aaKnown RBP18.75■□□□□ 0.59
SF1-221ENST00000633899 TMEM19Q96HH6 336 aa18.75■□□□□ 0.59
SF1-221ENST00000633899 PIGMQ9H3S5 423 aa18.75■□□□□ 0.59
SF1-221ENST00000633899 ZNF385DQ9H6B1 395 aa18.75■□□□□ 0.59
SF1-221ENST00000633899 SLC52A3Q9NQ40 469 aa18.75■□□□□ 0.59
SF1-221ENST00000633899 TIGARQ9NQ88 270 aa18.75■□□□□ 0.59
SF1-221ENST00000633899 EXOSC3Q9NQT5 275 aaKnown RBP18.75■□□□□ 0.59
SF1-221ENST00000633899 SLC25A37Q9NYZ2 338 aa18.75■□□□□ 0.59
SF1-221ENST00000633899 SLAMF8Q9P0V8 285 aa18.75■□□□□ 0.59
SF1-221ENST00000633899 CENPEQ02224 2701 aa18.75■□□□□ 0.59
SF1-221ENST00000633899 CELSR2Q9HCU4 2923 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 A0A0J9YW62 118 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 CLDN24A6NM45 220 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 ADAMDEC1O15204 470 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 CXCL13O43927 109 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 PLGP00747 810 aaPredicted RBP18.74■□□□□ 0.59
SF1-221ENST00000633899 NID1P14543 1247 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 RPS4Y1P22090 263 aaKnown RBP18.74■□□□□ 0.59
SF1-221ENST00000633899 PEX19P40855 299 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 SESN3P58005 492 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 MERTKQ12866 999 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 LARS2Q15031 903 aaKnown RBP18.74■□□□□ 0.59
SF1-221ENST00000633899 LIN52Q52LA3 116 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 SLC25A53Q5H9E4 307 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 GCNT6Q5T4J0 391 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 C3orf33Q6P1S2 294 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 POMZP3Q6PJE2 187 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 DMRTC2Q8IXT2 367 aaPredicted RBP18.74■□□□□ 0.59
SF1-221ENST00000633899 OR52P1PQ8NH57 321 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 REXO5Q96IC2 774 aaKnown RBP18.74■□□□□ 0.59
SF1-221ENST00000633899 ADGRG7Q96K78 797 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 TREX2Q9BQ50 279 aaPredicted RBP18.74■□□□□ 0.59
SF1-221ENST00000633899 VAPAQ9P0L0 249 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 PACSIN3Q9UKS6 424 aa18.74■□□□□ 0.59
SF1-221ENST00000633899 A0A0G2JPF8 293 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 A0A1W2PNV4 684 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms