RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 ZFP28Q8NHY6 868 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 MSI2Q96DH6 328 aaKnown RBP17.73■□□□□ 0.43
TARDBP-228ENST00000629725 OTUB1Q96FW1 271 aaPredicted RBP17.73■□□□□ 0.43
TARDBP-228ENST00000629725 INPP5KQ9BT40 448 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 MID1IP1Q9NPA3 183 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 TMEM216Q9P0N5 145 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 ZNF180Q9UJW8 692 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 ICAM5Q9UMF0 924 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 CARD8Q9Y2G2 431 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 ACTL7BQ9Y614 415 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 ZNF724A8MTY0 619 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 POC1B-GALNT4F8VUJ3 575 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 WIPF1O43516 503 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 LY6HO94772 140 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 PRKCAP17252 672 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 PRKAA2P54646 552 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 SUMO3P55854 103 aaPredicted RBP17.72■□□□□ 0.43
TARDBP-228ENST00000629725 SLC7A5Q01650 507 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 CHRNEQ04844 493 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 CHRNB3Q05901 458 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 GGTLC2Q14390 218 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 TOMM34Q15785 309 aaPredicted RBP17.72■□□□□ 0.43
TARDBP-228ENST00000629725 ANKRD26P1Q6NSI1 321 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 GALNT5Q7Z7M9 940 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 ZNF527Q8NB42 609 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 DCAKDQ8WVC6 231 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 JADE3Q92613 823 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 ZNF75CPQ92670 426 aaPredicted RBP17.72■□□□□ 0.43
TARDBP-228ENST00000629725 L3HYPDHQ96EM0 354 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 C16orf58Q96GQ5 468 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 MRGPRX4Q96LA9 322 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 SLC25A15Q9Y619 301 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 PMF1-BGLAPU3KQ54 211 aa17.72■□□□□ 0.43
TARDBP-228ENST00000629725 CIB4A0PJX0 185 aa17.71■□□□□ 0.43
TARDBP-228ENST00000629725 SMAD9O15198 467 aaKnown RBP17.71■□□□□ 0.43
TARDBP-228ENST00000629725 RSL1D1O76021 490 aaKnown RBP17.71■□□□□ 0.43
TARDBP-228ENST00000629725 POU6F2P78424 691 aaPredicted RBP17.71■□□□□ 0.43
TARDBP-228ENST00000629725 LRIG3Q6UXM1 1119 aa17.71■□□□□ 0.43
TARDBP-228ENST00000629725 TRIM46Q7Z4K8 759 aa17.71■□□□□ 0.43
TARDBP-228ENST00000629725 RELL1Q8IUW5 271 aa17.71■□□□□ 0.43
TARDBP-228ENST00000629725 UBE2J2Q8N2K1 259 aa17.71■□□□□ 0.43
TARDBP-228ENST00000629725 GPR119Q8TDV5 335 aa17.71■□□□□ 0.43
TARDBP-228ENST00000629725 BTBD2Q9BX70 525 aa17.71■□□□□ 0.43
TARDBP-228ENST00000629725 CDC42EP4Q9H3Q1 356 aaKnown RBP17.71■□□□□ 0.43
TARDBP-228ENST00000629725 EML4Q9HC35 981 aaKnown RBP17.71■□□□□ 0.43
TARDBP-228ENST00000629725 ARFGEF3Q5TH69 2177 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 TENM1Q9UKZ4 2725 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 A0A1W2PR80 420 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 CCT8L1PA6NM43 557 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 VWC2LB2RUY7 222 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 H3BNH8 94 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 M0R1B8 84 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 OIP5O43482 229 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 KIAA0513O60268 411 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 SNRPAP09012 282 aaKnown RBP17.7■□□□□ 0.42
TARDBP-228ENST00000629725 RNF144AP50876 292 aaPredicted RBP17.7■□□□□ 0.42
TARDBP-228ENST00000629725 KLHL26Q53HC5 615 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 FBXW9Q5XUX1 488 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 SYT10Q6XYQ8 523 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 C17orf53Q8N3J3 647 aaPredicted RBP17.7■□□□□ 0.42
TARDBP-228ENST00000629725 CHMP6Q96FZ7 201 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 PIMREGQ9BSJ6 248 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 PRR14Q9BWN1 585 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 GSTO2Q9H4Y5 243 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 RRAGDQ9NQL2 400 aaPredicted RBP17.7■□□□□ 0.42
TARDBP-228ENST00000629725 GIN1Q9NXP7 522 aa17.7■□□□□ 0.42
TARDBP-228ENST00000629725 GTPBP1O00178 669 aaKnown RBP17.69■□□□□ 0.42
TARDBP-228ENST00000629725 NDUFS8O00217 210 aa17.69■□□□□ 0.42
TARDBP-228ENST00000629725 SEC22BO75396 215 aa17.69■□□□□ 0.42
TARDBP-228ENST00000629725 IGHV3-9P01782 118 aa17.69■□□□□ 0.42
TARDBP-228ENST00000629725 APEHP13798 732 aaKnown RBP17.69■□□□□ 0.42
TARDBP-228ENST00000629725 ATP6V1C1P21283 382 aa17.69■□□□□ 0.42
TARDBP-228ENST00000629725 FRKP42685 505 aaPredicted RBP17.69■□□□□ 0.42
TARDBP-228ENST00000629725 NR4A2P43354 598 aa17.69■□□□□ 0.42
TARDBP-228ENST00000629725 PDLIM4P50479 330 aa17.69■□□□□ 0.42
TARDBP-228ENST00000629725 ETF1P62495 437 aaKnown RBP17.69■□□□□ 0.42
TARDBP-228ENST00000629725 ZNF385BQ569K4 471 aa17.69■□□□□ 0.42
TARDBP-228ENST00000629725 C3orf49Q96BT1 292 aa17.69■□□□□ 0.42
TARDBP-228ENST00000629725 PPCDCQ96CD2 204 aa17.69■□□□□ 0.42
TARDBP-228ENST00000629725 ZNF764Q96H86 408 aaPredicted RBP17.69■□□□□ 0.42
TARDBP-228ENST00000629725 OR5B2Q96R09 309 aa17.69■□□□□ 0.42
TARDBP-228ENST00000629725 HOXD1Q9GZZ0 328 aa17.69■□□□□ 0.42
TARDBP-228ENST00000629725 DUSP22Q9NRW4 184 aa17.69■□□□□ 0.42
TARDBP-228ENST00000629725 SH3BP4Q9P0V3 963 aa17.69■□□□□ 0.42
TARDBP-228ENST00000629725 ATP23Q9Y6H3 246 aa17.69■□□□□ 0.42
TARDBP-228ENST00000629725 NPIPA5A0A0B4J1W7 369 aa17.68■□□□□ 0.42
TARDBP-228ENST00000629725 NPIPA7E9PJI5 369 aa17.68■□□□□ 0.42
TARDBP-228ENST00000629725 TCF21O43680 179 aa17.68■□□□□ 0.42
TARDBP-228ENST00000629725 TGFAP01135 160 aa17.68■□□□□ 0.42
TARDBP-228ENST00000629725 NPIPA8P0DM63 369 aa17.68■□□□□ 0.42
TARDBP-228ENST00000629725 APOBEC3AP31941 199 aaPredicted RBP17.68■□□□□ 0.42
TARDBP-228ENST00000629725 KIAA0040Q15053 153 aa17.68■□□□□ 0.42
TARDBP-228ENST00000629725 SLC25A53Q5H9E4 307 aa17.68■□□□□ 0.42
TARDBP-228ENST00000629725 EXOSC6Q5RKV6 272 aaKnown RBP17.68■□□□□ 0.42
TARDBP-228ENST00000629725 C3orf33Q6P1S2 294 aa17.68■□□□□ 0.42
TARDBP-228ENST00000629725 LCA5Q86VQ0 697 aa17.68■□□□□ 0.42
TARDBP-228ENST00000629725 RFLNBQ8N5W9 214 aa17.68■□□□□ 0.42
TARDBP-228ENST00000629725 CDS1Q92903 461 aa17.68■□□□□ 0.42
TARDBP-228ENST00000629725 ARL8AQ96BM9 186 aa17.68■□□□□ 0.42
TARDBP-228ENST00000629725 ZNF524Q96C55 264 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms