RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 ZNF891A8MT65 544 aaPredicted RBP12.44□□□□□ -0.42
SYNGAP1-208ENST00000629380 STMND1H3BQB6 276 aa12.44□□□□□ -0.42
SYNGAP1-208ENST00000629380 NDUFB2O95178 105 aa12.44□□□□□ -0.42
SYNGAP1-208ENST00000629380 TMEM41BQ5BJD5 291 aa12.44□□□□□ -0.42
SYNGAP1-208ENST00000629380 SYPL2Q5VXT5 272 aa12.44□□□□□ -0.42
SYNGAP1-208ENST00000629380 TMEM185AQ8NFB2 350 aa12.44□□□□□ -0.42
SYNGAP1-208ENST00000629380 PRRC1Q96M27 445 aa12.44□□□□□ -0.42
SYNGAP1-208ENST00000629380 ST6GALNAC5Q9BVH7 336 aa12.44□□□□□ -0.42
SYNGAP1-208ENST00000629380 ARFGEF3Q5TH69 2177 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 C5P01031 1676 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 CKMT1AP12532 417 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 CSF2RAP15509 400 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 A0A0D9SG52 128 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 NPIPA7E9PJI5 369 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 SULT2B1O00204 365 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 NPIPA8P0DM63 369 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 HLA-EP13747 358 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 C5AR1P21730 350 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 CDONQ4KMG0 1287 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 HIST2H3PS2Q5TEC6 136 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 RFPL4BQ6ZWI9 263 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 WNT6Q9Y6F9 365 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 AHSGP02765 367 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 GGT1P19440 569 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 GABRR1P24046 479 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 TACR3P29371 465 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 SLC30A7Q8NEW0 376 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 SLC2A13Q96QE2 648 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 SLC23A2Q9UGH3 650 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 C4AP0C0L4 1744 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 CER1O95813 267 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 SNAI1O95863 264 aaPredicted RBP12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 CD1DP15813 335 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 NFYBP25208 207 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 BMPR1AP36894 532 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 GSK3AP49840 483 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 LAPTM4AQ15012 233 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 FAM180BQ6P0A1 224 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 ADAMTS16Q8TE57 1224 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 LMF1Q96S06 567 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 GABRQQ9UN88 632 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 ANHXE9PGG2 379 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 IL4RP24394 825 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 CSNK1A1P48729 337 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 FAM74A1Q5RGS3 127 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 EMC10Q5UCC4 262 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 MEX3BQ6ZN04 569 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 LPAR4Q99677 370 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 ARNT2Q9HBZ2 717 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 SIDT1Q9NXL6 827 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 F5H5K5 113 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 ATP1B3P54709 279 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 CTSL3PQ5NE16 218 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 LDLRAD1Q5T700 205 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 CMTM2Q8TAZ6 248 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 MUS81Q96NY9 551 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 SERINC2Q96SA4 455 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 NIPSNAP3BQ9BS92 247 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 SRPK3Q9UPE1 567 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 PCDHGA7Q9Y5G6 932 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 TRAV18A0A075B6X5 111 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 IRF4Q15306 451 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 WBP2NLQ6ICG8 309 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 ASRGL1Q7L266 308 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 OR2T27Q8NH04 317 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 OR4A16Q8NH70 328 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 NT5C3BQ969T7 300 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 PREBQ9HCU5 417 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 PCDHA9Q9Y5H5 950 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 CACNA1BQ00975 2339 aa12.43□□□□□ -0.42
SYNGAP1-208ENST00000629380 CXorf49A8MYA2 514 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 LILRB3O75022 631 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 KDF1Q8NAX2 398 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 SYNPRQ8TBG9 265 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 PATZ1Q9HBE1 687 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 ZBTB20Q9HC78 741 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 ZDHHC18Q9NUE0 388 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 MSTNO14793 375 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 LCMT2O60294 686 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 VNN1O95497 513 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 UBE2KP61086 200 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 ACY1Q03154 408 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 PCK2Q16822 640 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 DCAF12L1Q5VU92 463 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 IL17RDQ8NFM7 739 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 OR4K13Q8NH42 304 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 ITPKCQ96DU7 683 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 GMLQ99445 158 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 GINS3Q9BRX5 216 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 DYNLRB1Q9NP97 96 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 GKN1Q9NS71 199 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 PLEK2Q9NYT0 353 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 ZNF223Q9UK11 482 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 BOKQ9UMX3 212 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 FADS1O60427 444 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 UPK1BO75841 260 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 DEFA4P12838 97 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 RNF4P78317 190 aa12.42□□□□□ -0.42
SYNGAP1-208ENST00000629380 SHC2P98077 582 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms