RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SEC14L2O76054 403 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 CCNDBP1O95273 360 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 SP1P08047 785 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 CDKN2CP42773 168 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 CYB561P49447 251 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 SUMO3P55854 103 aaPredicted RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 AP1S2P56377 157 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 IL13RA1P78552 427 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 CD69Q07108 199 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 PMPCAQ10713 525 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 EPS8Q12929 822 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 KRTCAP3Q53RY4 240 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 OTUD3Q5T2D3 398 aaPredicted RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 GARNL3Q5VVW2 1013 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 PLAG1Q6DJT9 500 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 XAF1Q6GPH4 301 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 LAIR2Q6ISS4 152 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 CAPN13Q6MZZ7 669 aaPredicted RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 FAM180BQ6P0A1 224 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 TEPPQ6URK8 271 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 C16orf47Q6ZP98 133 aaPredicted RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 KCTD8Q6ZWB6 473 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 WDR53Q7Z5U6 358 aaPredicted RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 C17orf64Q86WR6 236 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 ZCCHC7Q8N3Z6 543 aaKnown RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 HDAC2Q92769 488 aaKnown RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 FBXL8Q96CD0 374 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 C11orf24Q96F05 449 aaPredicted RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 REXO5Q96IC2 774 aaKnown RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 COG8Q96MW5 612 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 INPP5KQ9BT40 448 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 DEFB126Q9BYW3 111 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 AMBRA1Q9C0C7 1298 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 TOR3AQ9H497 397 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 CXorf21Q9HAI6 301 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 CCDC177Q9NQR7 707 aaPredicted RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 ARL15Q9NXU5 204 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 SPATA7Q9P0W8 599 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 SNX6Q9UNH7 406 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 GMEB1Q9Y692 573 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 G3V2T6 193 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 SYT5O00445 386 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 OR1F1O43749 312 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 UGDHO60701 494 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 SCN2BO60939 215 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 HTR1AP08908 422 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 SLC35G6P0C7Q6 338 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 PCNAP12004 261 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 MAOAP21397 527 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 CRHBPP24387 322 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 ELK4P28324 431 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 PIGAP37287 484 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 IST1P53990 364 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 WNT3P56703 355 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 NUP107P57740 925 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 GABARAPL2P60520 117 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 TBPL1P62380 186 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 BTG2P78543 158 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 PLIN5Q00G26 463 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 PLGLB1Q02325 96 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 DCTN2Q13561 401 aaKnown RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 SGO1Q5FBB7 561 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 RBM48Q5RL73 367 aaKnown RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF585AQ6P3V2 769 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 TMEM205Q6UW68 189 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 VN1R4Q7Z5H5 301 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 TMEM179BQ7Z7N9 219 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 MMP21Q8N119 569 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 CHDHQ8NE62 594 aaPredicted RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 CLHC1Q8NHS4 586 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 FBXO30Q8TB52 745 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 WDR20Q8TBZ3 569 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 SELENOMQ8WWX9 145 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 ITCHQ96J02 903 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 RBM4BQ9BQ04 359 aaKnown RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 THUMPD3Q9BV44 507 aaKnown RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 RBM4Q9BWF3 364 aaKnown RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 EXO5Q9H790 373 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 KCNJ16Q9NPI9 418 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 PNO1Q9NRX1 252 aaKnown RBP4.44□□□□□ -1.7
LINC00550-201ENST00000629293 DNAJC11Q9NVH1 559 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 FAM118AQ9NWS6 357 aa4.44□□□□□ -1.7
LINC00550-201ENST00000629293 E9PQ18 207 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 DNAJB6O75190 326 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 GMNNO75496 209 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 NEURL1O76050 574 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 NSA2O95478 260 aaKnown RBP4.43□□□□□ -1.7
LINC00550-201ENST00000629293 ONECUT2O95948 504 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 CST1P01037 141 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 INHBBP09529 407 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 CD99P14209 185 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 CD22P20273 847 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 S100A3P33764 101 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 YAP1P46937 504 aaKnown RBP4.43□□□□□ -1.7
LINC00550-201ENST00000629293 MEOX1P50221 254 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 CSTF3Q12996 717 aaKnown RBP4.43□□□□□ -1.7
LINC00550-201ENST00000629293 FAM53BQ14153 422 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 E2F2Q14209 437 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 CTU2Q2VPK5 515 aaKnown RBP4.43□□□□□ -1.7
LINC00550-201ENST00000629293 TTC23Q5W5X9 447 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms