RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 FITM1A5D6W6 292 aa11.5□□□□□ -0.57
SYNGAP1-207ENST00000628646 MAN1A2O60476 641 aa11.5□□□□□ -0.57
SYNGAP1-207ENST00000628646 TBX19O60806 448 aa11.5□□□□□ -0.57
SYNGAP1-207ENST00000628646 FADS2O95864 444 aaKnown RBP11.5□□□□□ -0.57
SYNGAP1-207ENST00000628646 CD46P15529 392 aa11.5□□□□□ -0.57
SYNGAP1-207ENST00000628646 OR1E2P47887 323 aa11.5□□□□□ -0.57
SYNGAP1-207ENST00000628646 CYB561P49447 251 aa11.5□□□□□ -0.57
SYNGAP1-207ENST00000628646 GANABQ14697 944 aaKnown RBP11.5□□□□□ -0.57
SYNGAP1-207ENST00000628646 MFSD12Q6NUT3 480 aa11.5□□□□□ -0.57
SYNGAP1-207ENST00000628646 OLIG3Q7RTU3 272 aa11.5□□□□□ -0.57
SYNGAP1-207ENST00000628646 FEVQ99581 238 aa11.5□□□□□ -0.57
SYNGAP1-207ENST00000628646 BCL7BQ9BQE9 202 aa11.5□□□□□ -0.57
SYNGAP1-207ENST00000628646 AKIP1Q9NQ31 210 aa11.5□□□□□ -0.57
SYNGAP1-207ENST00000628646 DLL3Q9NYJ7 618 aa11.5□□□□□ -0.57
SYNGAP1-207ENST00000628646 RPL36Q9Y3U8 105 aaKnown RBP11.5□□□□□ -0.57
SYNGAP1-207ENST00000628646 MT-ND2P03891 347 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 LIFP15018 202 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 ST3GAL3Q11203 375 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 MICAQ29983 383 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 TIPARPQ7Z3E1 657 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 MRGPREQ86SM8 312 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 TEX19Q8NA77 164 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 PSD2Q9BQI7 771 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 MFRPQ9BY79 579 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 WDR54Q9H977 334 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 RNF6Q9Y252 685 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 COL4A2P08572 1712 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 hCG_2014768A0A024R1R8 64 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 OR2J2O76002 312 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 ADAP00813 363 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 TGM1P22735 817 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 STAT5AP42229 794 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 ZNF41P51814 821 aaPredicted RBP11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 CRB2Q5IJ48 1285 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 ATP1A1-AS1Q5TC04 95 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 C16orf47Q6ZP98 133 aaPredicted RBP11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 MED25Q71SY5 747 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 TRUB1Q8WWH5 349 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 ZCCHC14Q8WYQ9 949 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 B4GALT7Q9UBV7 327 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 SAGE2PA6NJ88 616 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 TTC36A6NLP5 189 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 POU2F1P14859 743 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 PAICSP22234 425 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 DEFA1P59665 94 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 DEFA3P59666 94 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 ZNF846Q147U1 533 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 EXOC3L2Q2M3D2 409 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 OR1N1Q8NGS0 311 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 NDNFQ8TB73 568 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 NKD1Q969G9 470 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 ANKRD9Q96BM1 317 aaPredicted RBP11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 NIPSNAP1Q9BPW8 284 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 NXF5Q9H1B4 397 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 J3QRK9 145 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 OPRL1P41146 370 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 GPR143P51810 404 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 HMGA2P52926 109 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 RNF4P78317 190 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 COX10Q12887 443 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 DUSP5Q16690 384 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 ZNF770Q6IQ21 691 aaPredicted RBP11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 PARP8Q8N3A8 854 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 ZADH2Q8N4Q0 377 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 PLPP5Q8NEB5 264 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 OR11G2Q8NGC1 345 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 DYNC2LI1Q8TCX1 351 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 BRIX1Q8TDN6 353 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 OMA1Q96E52 524 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 WDR12Q9GZL7 423 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 AICDAQ9GZX7 198 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 SYNPO2LQ9H987 977 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 KLK4Q9Y5K2 254 aa11.49□□□□□ -0.57
SYNGAP1-207ENST00000628646 HIST1H2ABP04908 130 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 PTNP21246 168 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 GPR85P60893 370 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 AIMP2Q13155 320 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 TRAM2Q15035 370 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 UBE2UQ5VVX9 321 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 DCDC5Q6ZRR9 648 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 HIST3H2AQ7L7L0 130 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 GALNT16Q8N428 558 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 HIST1H2ACQ93077 130 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 DNAJA3Q96EY1 480 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 LRFN5Q96NI6 719 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 MTHFD2LQ9H903 347 aaPredicted RBP11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 TAS2R7Q9NYW3 318 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 NPFFR2Q9Y5X5 522 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 J3KTA2 159 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 ITGA10O75578 1167 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 TGFBR1P36897 503 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 FRKP42685 505 aaPredicted RBP11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 IFITM3Q01628 133 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 EFR3AQ14156 821 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 SNAPC1Q16533 368 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 SGCBQ16585 318 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 PRSS48Q7RTY5 328 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 PIGUQ9H490 435 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 A4GALTQ9NPC4 353 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 ZNF226Q9NYT6 803 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms