RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 PAPOLBQ9NRJ5 636 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 PLA2G2EQ9NZK7 142 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 ENOPH1Q9UHY7 261 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 SCOCQ9UIL1 159 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 PADI1Q9ULC6 663 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 POFUT2Q9Y2G5 429 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 PCDHGA6Q9Y5G7 932 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 EML6Q6ZMW3 1958 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 A0A087WUU8 490 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 TRIM64A6NGJ6 449 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 ADAM10O14672 748 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 OR10H3O60404 316 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 CYP7B1O75881 506 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 TP53P04637 393 aaPredicted RBP8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 CD63P08962 238 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 CYP4B1P13584 511 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 KRT20P35900 424 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 ACAA2P42765 397 aaKnown RBP8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 NR0B1P51843 470 aaKnown RBP8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 ISL1P61371 349 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 PSPHP78330 225 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 RAPSNQ13702 412 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 FGFBP1Q14512 234 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 NCF4Q15080 339 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 CTU2Q2VPK5 515 aaKnown RBP8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 KLHL26Q53HC5 615 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF691Q5VV52 312 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 PGBD2Q6P3X8 592 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 KLHL17Q6TDP4 642 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 HSDL2Q6YN16 418 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 WDR88Q6ZMY6 472 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 Q6ZPB1 254 aaPredicted RBP8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 ASB18Q6ZVZ8 466 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 GRAMD2AQ8IUY3 354 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 APLFQ8IW19 511 aaPredicted RBP8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 CMIPQ8IY22 773 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 C8orf59Q8N0T1 100 aaPredicted RBP8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF527Q8NB42 609 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 AQP11Q8NBQ7 271 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 C17orf47Q8NEP4 570 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 FBLIM1Q8WUP2 373 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 SLC38A4Q969I6 547 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 HSPBAP1Q96EW2 488 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 GPA33Q99795 319 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 PRSS27Q9BQR3 290 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 RTN4RQ9BZR6 473 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 POLR2J2Q9GZM3 115 aaKnown RBP8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 POLR2J3Q9H1A7 115 aaKnown RBP8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 ANKRD19PQ9H560 264 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 LIN28AQ9H9Z2 209 aaKnown RBP8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 DNAJB12Q9NXW2 375 aaKnown RBP8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 REV1Q9UBZ9 1251 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 TESQ9UGI8 421 aaKnown RBP8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 NDRG4Q9ULP0 352 aaKnown RBP8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 MGAT4BQ9UQ53 548 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 TP53TG5Q9Y2B4 290 aa8.71□□□□□ -1.01
PDLIM5-223ENST00000627587 C21orf140B9A014 251 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 BCKDKO14874 412 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 TO15178 435 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 TSPAN2O60636 221 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 FMO6PO60774 539 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 SEC24DO94855 1032 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 OR5F1O95221 314 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 ADAP00813 363 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 POU2F1P14859 743 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 HPGDP15428 266 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 IL12BP29460 328 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 LCN1P31025 176 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 RPS6KA3P51812 740 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 NPRL3Q12980 569 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 IL18R1Q13478 541 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 TRAM2Q15035 370 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 NDUFAF6Q330K2 333 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 TMEM154Q6P9G4 183 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 TTC33Q6PID6 262 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 C16orf47Q6ZP98 133 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 GDF7Q7Z4P5 450 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 ZER1Q7Z7L7 766 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 NKAIN4Q8IVV8 208 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 PRR22Q8IZ63 422 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 GALNT11Q8NCW6 608 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 FAM71CQ8NEG0 241 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 TOR1AIP2Q8NFQ8 470 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 SLC35B4Q969S0 331 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 GTPBP3Q969Y2 492 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 VMP1Q96GC9 406 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 SLC41A3Q96GZ6 507 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 PITX2Q99697 317 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 KLHDC3Q9BQ90 382 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 GPR87Q9BY21 358 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 ING2Q9H160 280 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 ZNF696Q9H7X3 374 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 UBQLN4Q9NRR5 601 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 PTRH2Q9Y3E5 179 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 LOC102723996A0A087X1L8 192 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 SERINC4A6NH21 518 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 C17orf51A8MQB3 221 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 H3BNH8 94 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 OIP5O43482 229 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 REM1O75628 298 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms