RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 PRSS50Q9UI38 385 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 KCNE3Q9Y6H6 103 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 TMEM233B4DJY2 109 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 KIF2AO00139 706 aaPredicted RBP16.82■□□□□ 0.28
SMN1-211ENST00000625245 SCAMP2O15127 329 aaKnown RBP16.82■□□□□ 0.28
SMN1-211ENST00000625245 TRIM13O60858 407 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 LYZL6O75951 148 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 IGHV4-39P01824 125 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 PRKCAP17252 672 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 KRT4P19013 534 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 ATP12AP54707 1039 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 SUMO3P55854 103 aaPredicted RBP16.82■□□□□ 0.28
SMN1-211ENST00000625245 PCLAFQ15004 111 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.82■□□□□ 0.28
SMN1-211ENST00000625245 HMBOX1Q6NT76 420 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 RNF165Q6ZSG1 346 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 OR2W6PQ8NHA6 318 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 TWIST2Q8WVJ9 160 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 UBLCP1Q8WVY7 318 aaPredicted RBP16.82■□□□□ 0.28
SMN1-211ENST00000625245 OR5P2Q8WZ92 322 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 MRGPRX4Q96LA9 322 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 HS6ST2Q96MM7 605 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 USB1Q9BQ65 265 aaKnown RBP16.82■□□□□ 0.28
SMN1-211ENST00000625245 TRMOQ9BU70 441 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 CXorf36Q9H7Y0 433 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 ANKZF1Q9H8Y5 726 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 KLHL9Q9P2J3 617 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 MID2Q9UJV3 735 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 DTNAQ9Y4J8 743 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 ACTL7BQ9Y614 415 aa16.82■□□□□ 0.28
SMN1-211ENST00000625245 FBN1P35555 2871 aaKnown RBP16.81■□□□□ 0.28
SMN1-211ENST00000625245 TMEM114B3SHH9 223 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 RAMP1O60894 148 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 ADAM11O75078 769 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 NDUFS7O75251 213 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 CHRNGP07510 517 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 MAPK1P28482 360 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 RPL3P39023 403 aaKnown RBP16.81■□□□□ 0.28
SMN1-211ENST00000625245 RAC3P60763 192 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 RASGEF1BQ0VAM2 473 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 SELENBP1Q13228 472 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 PGGHGQ32M88 737 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 Q6ZT83 130 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.81■□□□□ 0.28
SMN1-211ENST00000625245 TDRPQ86YL5 185 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 OR56A1Q8NGH5 318 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 ZNF524Q96C55 264 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 OR5B2Q96R09 309 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 TRIM2Q9C040 744 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 L2HGDHQ9H9P8 463 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 CISD1Q9NZ45 108 aaKnown RBP16.81■□□□□ 0.28
SMN1-211ENST00000625245 GDF2Q9UK05 429 aaPredicted RBP16.81■□□□□ 0.28
SMN1-211ENST00000625245 TRAF6Q9Y4K3 522 aa16.81■□□□□ 0.28
SMN1-211ENST00000625245 PIP5K1BO14986 540 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 CFLARO15519 480 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 PEX11AO75192 247 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 CYP7B1O75881 506 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 C6orf47O95873 294 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 KRT16P08779 473 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 PTNP21246 168 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 OR3A2P47893 321 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 C21orf58P58505 322 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 PPA1Q15181 289 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 QPRTQ15274 297 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 LSM12Q3MHD2 195 aaKnown RBP16.8■□□□□ 0.28
SMN1-211ENST00000625245 TOR1AIP2Q8NFQ8 470 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 OR5W2Q8NH69 310 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 AGR3Q8TD06 166 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 EPS8L3Q8TE67 593 aaKnown RBP16.8■□□□□ 0.28
SMN1-211ENST00000625245 ARL8AQ96BM9 186 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 MUCL1Q96DR8 90 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 PPP3R2Q96LZ3 170 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 PSD2Q9BQI7 771 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 C1orf50Q9BV19 199 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 BCO1Q9HAY6 547 aa16.8■□□□□ 0.28
SMN1-211ENST00000625245 ING1Q9UK53 422 aaPredicted RBP16.8■□□□□ 0.28
SMN1-211ENST00000625245 ANK3Q12955 4377 aaKnown RBP16.8■□□□□ 0.28
SMN1-211ENST00000625245 RNF212BA8MTL3 300 aa16.79■□□□□ 0.28
SMN1-211ENST00000625245 ZNF264O43296 627 aa16.79■□□□□ 0.28
SMN1-211ENST00000625245 FGF4P08620 206 aa16.79■□□□□ 0.28
SMN1-211ENST00000625245 UBL4AP11441 157 aa16.79■□□□□ 0.28
SMN1-211ENST00000625245 EDNRAP25101 427 aa16.79■□□□□ 0.28
SMN1-211ENST00000625245 CBFBQ13951 182 aa16.79■□□□□ 0.28
SMN1-211ENST00000625245 PTGR1Q14914 329 aa16.79■□□□□ 0.28
SMN1-211ENST00000625245 UGT3A2Q3SY77 523 aa16.79■□□□□ 0.28
SMN1-211ENST00000625245 SEZ6L2Q6UXD5 910 aa16.79■□□□□ 0.28
SMN1-211ENST00000625245 ZNF100Q8IYN0 542 aa16.79■□□□□ 0.28
SMN1-211ENST00000625245 OR5AK3PQ8NH89 298 aa16.79■□□□□ 0.28
SMN1-211ENST00000625245 OR7D2Q96RA2 312 aa16.79■□□□□ 0.28
SMN1-211ENST00000625245 ZNF300Q96RE9 604 aaPredicted RBP16.79■□□□□ 0.28
SMN1-211ENST00000625245 TRAF4Q9BUZ4 470 aaPredicted RBP16.79■□□□□ 0.28
SMN1-211ENST00000625245 THUMPD3Q9BV44 507 aaKnown RBP16.79■□□□□ 0.28
SMN1-211ENST00000625245 QRSL1Q9H0R6 528 aaKnown RBP16.79■□□□□ 0.28
SMN1-211ENST00000625245 ATAD3AQ9NVI7 634 aa16.79■□□□□ 0.28
SMN1-211ENST00000625245 GPATCH2Q9NW75 528 aa16.79■□□□□ 0.28
SMN1-211ENST00000625245 NPIPB9F8W1W9 429 aa16.78■□□□□ 0.28
SMN1-211ENST00000625245 TLX2O43763 284 aaPredicted RBP16.78■□□□□ 0.28
SMN1-211ENST00000625245 CD5LO43866 347 aa16.78■□□□□ 0.28
SMN1-211ENST00000625245 SSX4O60224 188 aa16.78■□□□□ 0.28
SMN1-211ENST00000625245 EIF4E2O60573 245 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms