RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 SLC26A1Q9H2B4 701 aa15.05■□□□□ -0
LDB3-208ENST00000623007 LIN28AQ9H9Z2 209 aaKnown RBP15.05■□□□□ -0
LDB3-208ENST00000623007 PPIEQ9UNP9 301 aaKnown RBP15.05■□□□□ -0
LDB3-208ENST00000623007 PCDHGB6Q9Y5F9 930 aa15.05■□□□□ -0
LDB3-208ENST00000623007 PCDHGA5Q9Y5G8 931 aa15.05■□□□□ -0
LDB3-208ENST00000623007 A3GALT2U3KPV4 340 aa15.05■□□□□ -0
LDB3-208ENST00000623007 A0A087WUJ7 227 aa15.04■□□□□ -0
LDB3-208ENST00000623007 TMEM129A0AVI4 362 aa15.04■□□□□ -0
LDB3-208ENST00000623007 TMEM221A6NGB7 291 aa15.04■□□□□ -0
LDB3-208ENST00000623007 M0R296 226 aa15.04■□□□□ -0
LDB3-208ENST00000623007 GTPBP1O00178 669 aaKnown RBP15.04■□□□□ -0
LDB3-208ENST00000623007 HYAL3O43820 417 aaPredicted RBP15.04■□□□□ -0
LDB3-208ENST00000623007 AIREO43918 545 aa15.04■□□□□ -0
LDB3-208ENST00000623007 IFNGP01579 166 aa15.04■□□□□ -0
LDB3-208ENST00000623007 SCG5P05408 212 aa15.04■□□□□ -0
LDB3-208ENST00000623007 IGFBP1P08833 259 aaPredicted RBP15.04■□□□□ -0
LDB3-208ENST00000623007 ZGLP1P0C6A0 271 aa15.04■□□□□ -0
LDB3-208ENST00000623007 RGS6P49758 472 aa15.04■□□□□ -0
LDB3-208ENST00000623007 SPHARQ15513 63 aa15.04■□□□□ -0
LDB3-208ENST00000623007 VWA2Q5GFL6 755 aa15.04■□□□□ -0
LDB3-208ENST00000623007 FNDC7Q5VTL7 733 aa15.04■□□□□ -0
LDB3-208ENST00000623007 ZC3H14Q6PJT7 736 aaKnown RBP15.04■□□□□ -0
LDB3-208ENST00000623007 USP43Q70EL4 1123 aa15.04■□□□□ -0
LDB3-208ENST00000623007 OVCH1Q7RTY7 1134 aa15.04■□□□□ -0
LDB3-208ENST00000623007 IQCF1Q8N6M8 205 aa15.04■□□□□ -0
LDB3-208ENST00000623007 PSD4Q8NDX1 1056 aa15.04■□□□□ -0
LDB3-208ENST00000623007 OR8D4Q8NGM9 314 aa15.04■□□□□ -0
LDB3-208ENST00000623007 OR4C3Q8NH37 302 aa15.04■□□□□ -0
LDB3-208ENST00000623007 OR8K3Q8NH51 312 aa15.04■□□□□ -0
LDB3-208ENST00000623007 JAM3Q9BX67 310 aa15.04■□□□□ -0
LDB3-208ENST00000623007 WWTR1Q9GZV5 400 aa15.04■□□□□ -0
LDB3-208ENST00000623007 LAT2Q9GZY6 243 aa15.04■□□□□ -0
LDB3-208ENST00000623007 NXF5Q9H1B4 397 aaKnown RBP15.04■□□□□ -0
LDB3-208ENST00000623007 UBQLN3Q9H347 655 aa15.04■□□□□ -0
LDB3-208ENST00000623007 SIAEQ9HAT2 523 aa15.04■□□□□ -0
LDB3-208ENST00000623007 PALMDQ9NP74 551 aa15.04■□□□□ -0
LDB3-208ENST00000623007 WDR70Q9NW82 654 aa15.04■□□□□ -0
LDB3-208ENST00000623007 ATXN7L1Q9ULK2 861 aaPredicted RBP15.04■□□□□ -0
LDB3-208ENST00000623007 ICAM5Q9UMF0 924 aa15.04■□□□□ -0
LDB3-208ENST00000623007 SIGLEC7Q9Y286 467 aa15.04■□□□□ -0
LDB3-208ENST00000623007 NTNG1Q9Y2I2 539 aa15.04■□□□□ -0
LDB3-208ENST00000623007 PRUNE2Q8WUY3 3088 aa15.04■□□□□ -0
LDB3-208ENST00000623007 UTS2O95399 124 aa15.03■□□□□ -0
LDB3-208ENST00000623007 HEXBP07686 556 aa15.03■□□□□ -0
LDB3-208ENST00000623007 CD63P08962 238 aa15.03■□□□□ -0
LDB3-208ENST00000623007 ZNF182P17025 639 aaPredicted RBP15.03■□□□□ -0
LDB3-208ENST00000623007 HTR1FP30939 366 aa15.03■□□□□ -0
LDB3-208ENST00000623007 GRK6P43250 576 aa15.03■□□□□ -0
LDB3-208ENST00000623007 CDH11P55287 796 aa15.03■□□□□ -0
LDB3-208ENST00000623007 MLLT11Q13015 90 aaPredicted RBP15.03■□□□□ -0
LDB3-208ENST00000623007 EFR3AQ14156 821 aa15.03■□□□□ -0
LDB3-208ENST00000623007 MED22Q15528 200 aa15.03■□□□□ -0
LDB3-208ENST00000623007 C1orf189Q5VU69 101 aa15.03■□□□□ -0
LDB3-208ENST00000623007 ARHGAP11AQ6P4F7 1023 aa15.03■□□□□ -0
LDB3-208ENST00000623007 OAFQ86UD1 273 aa15.03■□□□□ -0
LDB3-208ENST00000623007 NANOGP1Q8N7R0 232 aa15.03■□□□□ -0
LDB3-208ENST00000623007 ZSCAN1Q8NBB4 408 aa15.03■□□□□ -0
LDB3-208ENST00000623007 ZBTB44Q8NCP5 570 aa15.03■□□□□ -0
LDB3-208ENST00000623007 AGBL5Q8NDL9 886 aa15.03■□□□□ -0
LDB3-208ENST00000623007 NUBPLQ8TB37 319 aa15.03■□□□□ -0
LDB3-208ENST00000623007 TMEM43Q9BTV4 400 aa15.03■□□□□ -0
LDB3-208ENST00000623007 DPH1Q9BZG8 443 aa15.03■□□□□ -0
LDB3-208ENST00000623007 SEMA4CQ9C0C4 833 aa15.03■□□□□ -0
LDB3-208ENST00000623007 DSN1Q9H410 356 aa15.03■□□□□ -0
LDB3-208ENST00000623007 PLGRKTQ9HBL7 147 aa15.03■□□□□ -0
LDB3-208ENST00000623007 NTN3O00634 580 aaPredicted RBP15.03■□□□□ -0
LDB3-208ENST00000623007 PIP5K1CO60331 668 aa15.03■□□□□ -0
LDB3-208ENST00000623007 CPNE3O75131 537 aaKnown RBP15.03■□□□□ -0
LDB3-208ENST00000623007 PTHP01270 115 aa15.03■□□□□ -0
LDB3-208ENST00000623007 NAGAP17050 411 aa15.03■□□□□ -0
LDB3-208ENST00000623007 PAICSP22234 425 aaKnown RBP15.03■□□□□ -0
LDB3-208ENST00000623007 TGFBR2P37173 567 aa15.03■□□□□ -0
LDB3-208ENST00000623007 PRPS1P60891 318 aa15.03■□□□□ -0
LDB3-208ENST00000623007 PLAURQ03405 335 aa15.03■□□□□ -0
LDB3-208ENST00000623007 ISXQ2M1V0 245 aa15.03■□□□□ -0
LDB3-208ENST00000623007 AADACL4Q5VUY2 407 aa15.03■□□□□ -0
LDB3-208ENST00000623007 SLC30A6Q6NXT4 461 aa15.03■□□□□ -0
LDB3-208ENST00000623007 COX15Q7KZN9 410 aa15.03■□□□□ -0
LDB3-208ENST00000623007 CADM2Q8N3J6 435 aa15.03■□□□□ -0
LDB3-208ENST00000623007 AMER2Q8N7J2 671 aa15.03■□□□□ -0
LDB3-208ENST00000623007 OR5L2Q8NGL0 311 aa15.03■□□□□ -0
LDB3-208ENST00000623007 GRHL3Q8TE85 626 aa15.03■□□□□ -0
LDB3-208ENST00000623007 S100ZQ8WXG8 99 aa15.03■□□□□ -0
LDB3-208ENST00000623007 ZHX1-C8orf76Q96EF9 292 aa15.03■□□□□ -0
LDB3-208ENST00000623007 SGTBQ96EQ0 304 aa15.03■□□□□ -0
LDB3-208ENST00000623007 VMP1Q96GC9 406 aa15.03■□□□□ -0
LDB3-208ENST00000623007 SAMD8Q96LT4 415 aa15.03■□□□□ -0
LDB3-208ENST00000623007 NUDT9Q9BW91 350 aa15.03■□□□□ -0
LDB3-208ENST00000623007 WDR54Q9H977 334 aa15.03■□□□□ -0
LDB3-208ENST00000623007 INPP5EQ9NRR6 644 aa15.03■□□□□ -0
LDB3-208ENST00000623007 FLRT3Q9NZU0 649 aa15.03■□□□□ -0
LDB3-208ENST00000623007 AKAP7Q9P0M2 348 aaPredicted RBP15.03■□□□□ -0
LDB3-208ENST00000623007 OR6C70A6NIJ9 312 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 SAGE2PA6NJ88 616 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 SLC22A31A6NKX4 558 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 VSTM2BA6NLU5 285 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 RIIAD1A6NNX1 92 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 ALG1L2C9J202 215 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 D6RAR5 112 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 M0R082 166 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms