RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 EDNRBP24530 442 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 CRATP43155 626 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 SLC11A2P49281 568 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 CSNK1EP49674 416 aaKnown RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 PKIAP61925 76 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 PPIAP62937 165 aaKnown RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 SORDQ00796 357 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 TTLL4Q14679 1199 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 C18orf21Q32NC0 220 aaPredicted RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 TRIM46Q7Z4K8 759 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 TAC4Q86UU9 113 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 ZNF227Q86WZ6 799 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 PPP1R35Q8TAP8 253 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 STOML3Q8TAV4 291 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 OSTF1Q92882 214 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 ARL11Q969Q4 196 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 NTAN1Q96AB6 310 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 LINGO1Q96FE5 620 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 CPNE2Q96FN4 548 aaPredicted RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 ARHGAP9Q9BRR9 750 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 ZDHHC5Q9C0B5 715 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 CHRDQ9H2X0 955 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 OR51B6Q9H340 312 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 C1GALT1Q9NS00 363 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 ACER3Q9NUN7 267 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 EXOSC1Q9Y3B2 195 aaKnown RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 CCL27Q9Y4X3 112 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 OTOFQ9HC10 1997 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 IGKV6D-21A0A0A0MT36 114 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 HEPACAM2A8MVW5 462 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 ZBTB42B2RXF5 422 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 MATN3O15232 486 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 CHST10O43529 356 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 FRS3O43559 492 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 SLC25A12O75746 678 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 PLGP00747 810 aaPredicted RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 IGHV2-5P01817 119 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 ADH1AP07327 375 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 RHOP08100 348 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 SNRNP70P08621 437 aaKnown RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 IGFBP1P08833 259 aaPredicted RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 PRPS2P11908 318 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 ADRB3P13945 408 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 INSRRP14616 1297 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 GJA1P17302 382 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 LAG3P18627 525 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 UQCRC2P22695 453 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 CRABP1P29762 137 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 SOX18P35713 384 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 ART1P52961 327 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 TRAM1Q15629 374 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 ZNF239Q16600 458 aaKnown RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 CRB2Q5IJ48 1285 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 ZDHHC20Q5W0Z9 365 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 SPRYD7Q5W111 196 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 ARMCX2Q7L311 632 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 CPXM2Q8N436 756 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 OR5M1Q8NGP8 315 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 HMGB4Q8WW32 186 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 HIST1H2BAQ96A08 127 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 RGMAQ96B86 450 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 MARS2Q96GW9 593 aaKnown RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 OR1F2PQ96R84 312 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 NAA11Q9BSU3 229 aaPredicted RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 TM6SF2Q9BZW4 377 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 PRO1933Q9H354 126 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 CCDC86Q9H6F5 360 aaKnown RBP7.39□□□□□ -1.23
VPS11-209ENST00000622309 RCE1Q9Y256 329 aa7.39□□□□□ -1.23
VPS11-209ENST00000622309 A0A0D9SG52 128 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 SNRPGP15A8MWD9 76 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 C22orf46C9J442 243 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 NPIPB9F8W1W9 429 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 PCDH7O60245 1069 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 OR10H3O60404 316 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 CIDEAO60543 219 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 CRTAPO75718 401 aaPredicted RBP7.38□□□□□ -1.23
VPS11-209ENST00000622309 CPT2P23786 658 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 GDNFP39905 211 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 MTNR1BP49286 362 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 DGKGP49619 791 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 ANXA11P50995 505 aaKnown RBP7.38□□□□□ -1.23
VPS11-209ENST00000622309 AP3S2P59780 193 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 NUTF2P61970 127 aaKnown RBP7.38□□□□□ -1.23
VPS11-209ENST00000622309 HNRNPKP61978 463 aaKnown RBP eCLIP7.38□□□□□ -1.23
VPS11-209ENST00000622309 E2F1Q01094 437 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 KLF9Q13886 244 aaPredicted RBP7.38□□□□□ -1.23
VPS11-209ENST00000622309 LIPNQ5VXI9 398 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 ZNF626Q68DY1 528 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 RPUSD3Q6P087 351 aaKnown RBP7.38□□□□□ -1.23
VPS11-209ENST00000622309 ZNF546Q86UE3 836 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 THEM5Q8N1Q8 247 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 OR4L1Q8NH43 312 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 SPPL3Q8TCT6 385 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 MGME1Q9BQP7 344 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 POLR2J3Q9H1A7 115 aaKnown RBP7.38□□□□□ -1.23
VPS11-209ENST00000622309 FAM124BQ9H5Z6 455 aaPredicted RBP7.38□□□□□ -1.23
VPS11-209ENST00000622309 TMEM231Q9H6L2 316 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 WDCPQ9H6R7 721 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 ASIC5Q9NY37 505 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 TAS2R5Q9NYW4 299 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms