RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 SERTAD3Q9UJW9 196 aa8.9□□□□□ -0.98
IGHV3-54-201ENST00000622166 ICAM5Q9UMF0 924 aa8.9□□□□□ -0.98
IGHV3-54-201ENST00000622166 NCKAP1Q9Y2A7 1128 aa8.9□□□□□ -0.98
IGHV3-54-201ENST00000622166 MRPS2Q9Y399 296 aaKnown RBP8.9□□□□□ -0.98
IGHV3-54-201ENST00000622166 MAU2Q9Y6X3 613 aa8.9□□□□□ -0.98
IGHV3-54-201ENST00000622166 TRAV1-2A0A0B4J238 106 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 A0A0B4J2E0 115 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 A0A0J9YY10 115 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 A0A1B0GX12 115 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 GXYLT2A0PJZ3 443 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 ZC3H12DA2A288 527 aaKnown RBP8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 ANKRD34BA5PLL1 514 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 OR6C74A6NCV1 312 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 GRXCR1A8MXD5 290 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 E9PI62 339 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 PEX12O00623 359 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 DVL2O14641 736 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 OGG1O15527 345 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 CHP2O43745 196 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 GALR3O60755 368 aaPredicted RBP8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 REM1O75628 298 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 CT62P0C5K7 136 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 IL9P15248 144 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 POLR2CP19387 275 aaPredicted RBP8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 FUT1P19526 365 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 SLC6A6P31641 620 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 ACTR1BP42025 376 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 INPP1P49441 399 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 ACTR1AP61163 376 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 RRAS2P62070 204 aaPredicted RBP8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 YPEL5P62699 121 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 RACK1P63244 317 aaKnown RBP8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 ID2Q02363 134 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 COL9A2Q14055 689 aaPredicted RBP8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 EFR3AQ14156 821 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 GPR176Q14439 515 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 PLA1AQ53H76 456 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 IDNKQ5T6J7 187 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 DMKNQ6E0U4 476 aaPredicted RBP8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 ANKRD54Q6NXT1 300 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 PARM1Q6UWI2 310 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 PAMR1Q6UXH9 720 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 LINC00114Q6XXX2 140 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 ABI3BPQ7Z7G0 1075 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 OAFQ86UD1 273 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 MS4A15Q8N5U1 240 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 ZNF655Q8N720 491 aaPredicted RBP8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 YIPF7Q8N8F6 280 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 TMEM52Q8NDY8 209 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 OR4M1Q8NGD0 313 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 CCL4L1Q8NHW4 92 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 BAHD1Q8TBE0 780 aaPredicted RBP8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 UBASH3BQ8TF42 649 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 SMPDL3BQ92485 455 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 CNOT9Q92600 299 aaKnown RBP8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 TRIM63Q969Q1 353 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 TSACCQ96A04 125 aaPredicted RBP8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 CREB3L1Q96BA8 519 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 NACC2Q96BF6 587 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 ANKRD9Q96BM1 317 aaPredicted RBP8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 FYTTD1Q96QD9 318 aaKnown RBP8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 GON7Q9BXV9 100 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 TMEM168Q9H0V1 697 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 ERVMER34-1Q9H9K5 563 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 MEPEQ9NQ76 525 aaPredicted RBP8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 FLRT3Q9NZU0 649 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 NLKQ9UBE8 527 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 ST6GALNAC2Q9UJ37 374 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 ZMIZ1Q9ULJ6 1067 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 NOX1Q9Y5S8 564 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 NPFFR2Q9Y5X5 522 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 TICRRQ7Z2Z1 1910 aa8.89□□□□□ -0.99
IGHV3-54-201ENST00000622166 FANCMQ8IYD8 2048 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 TRBV23OR9-2A0A075B6M9 112 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 NPIPA5A0A0B4J1W7 369 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 A0A0G2JMP0 313 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 A0A0X1KG70 313 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 A0A1B0GWA3 101 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 ZNF860A6NHJ4 632 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 OR6C70A6NIJ9 312 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 C2orf74A8MZ97 194 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 C10orf142B7Z368 130 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 NPIPA7E9PJI5 369 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 INMT-MINDY4F8WBC2 141 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 RFXAPO00287 272 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 HYAL3O43820 417 aaPredicted RBP8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 LDB3O75112 727 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 RFPL3O75679 317 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 RASGRP1O95267 797 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 KLF8O95600 359 aaPredicted RBP8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 CBX7O95931 251 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 SERPINA3P01011 423 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 IFNGP01579 166 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 EIF4EP06730 217 aaKnown RBP8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 SLC35E2P0CK97 266 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 NPIPA8P0DM63 369 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 PSKH1P11801 424 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 PEPDP12955 493 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 HOXB2P14652 356 aa8.88□□□□□ -0.99
IGHV3-54-201ENST00000622166 HNRNPA2B1P22626 353 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms