RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 CTHP32929 405 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 CXADRP78310 365 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 C5orf46Q6UWT4 87 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 NRMQ8IXM6 262 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 MMP21Q8N119 569 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM217Q8N7C4 229 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 OR8J1Q8NGP2 316 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 SFT2D1Q8WV19 159 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TAAR8Q969N4 342 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 FCRL5Q96RD9 977 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 GORASP2Q9H8Y8 452 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM184CQ9NVA4 438 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 BABAM2Q9NXR7 383 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 HSF4Q9ULV5 492 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 M0R082 166 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF91Q05481 1191 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 INCA1Q0VD86 236 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 LASP1Q14847 261 aaKnown RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 OR5M8Q8NGP6 311 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 CLCC1Q96S66 551 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 PARD6AQ9NPB6 346 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 LSM7Q9UK45 103 aaKnown RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 MYH4Q9Y623 1939 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 AK4P27144 223 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF704Q6ZNC4 412 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 STPG2Q8N412 459 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 ZBED3Q96IU2 234 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 ACPTQ9BZG2 426 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 BCO1Q9HAY6 547 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 ZCCHC3Q9NUD5 404 aaKnown RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 NENFQ9UMX5 172 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 MYH2Q9UKX2 1941 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 ATRNO75882 1429 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 ADAM10O14672 748 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 UQCRC2P22695 453 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 GNRHRP30968 328 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 SLC10A6Q3KNW5 377 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF528Q3MIS6 628 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 PLAC9Q5JTB6 97 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 ENPP7Q6UWV6 458 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 CHST13Q8NET6 341 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 OR2T33Q8NG76 320 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 ASB13Q8WXK3 278 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 UPRTQ96BW1 309 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 ELOVL2Q9NXB9 296 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 AKAP12Q02952 1782 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TBC1D3DA0A087WVF3 549 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TBC1D3IA0A087WXS9 549 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TBC1D3EA0A087X179 549 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TBC1D3KA0A087X1G2 549 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TBC1D3BA6NDS4 549 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TBC1D3FA6NER0 549 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF850A8MQ14 1090 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TBC1D3LB9A6J9 549 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 GFRA2O00451 464 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 SLC31A2O15432 143 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TBC1D3HP0C7X1 549 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TACR2P21452 398 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 SLC6A9P48067 706 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 RAB30Q15771 203 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TRIM61Q5EBN2 209 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TBC1D3GQ6DHY5 549 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TBC1D3CQ6IPX1 549 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM220Q6QAJ8 160 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TBC1D3Q8IZP1 549 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM37Q8WXS4 190 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 EXO1Q9UQ84 846 aaKnown RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 FBXO7Q9Y3I1 522 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 HSPE1-MOB4S4R3N1 261 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 HOXA1P49639 335 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 STK19P49842 368 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 MAT1AQ00266 395 aaKnown RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 ADIRFQ15847 76 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 OR2A2Q6IF42 318 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 NIPA1Q7RTP0 329 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 CPEB2Q7Z5Q1 589 aaKnown RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TVP23CQ96ET8 276 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 PEX11GQ96HA9 241 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 DPH1Q9BZG8 443 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 TESQ9UGI8 421 aaKnown RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 SLIT1O75093 1534 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 INSIG1O15503 277 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 HYAL3O43820 417 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 AK1P00568 194 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 CFDP00746 253 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 RPL29P47914 159 aaKnown RBP4.73□□□□□ -1.65
VPS13D-214ENST00000620676 FABP5Q01469 135 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 GNMTQ14749 295 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 OPALINQ96PE5 141 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 ORAI3Q9BRQ5 295 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 SRRQ9GZT4 340 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 SLC7A11Q9UPY5 501 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 ADGRB3O60242 1522 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 NPIPA5E9PKD4 350 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 NPIPA3F8WFD2 350 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 H7C417 338 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 LIMK1P53667 647 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 RGNQ15493 299 aa4.73□□□□□ -1.65
VPS13D-214ENST00000620676 PRSS55Q6UWB4 352 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms