RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 HTR2BP41595 481 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 SRP9P49458 86 aaKnown RBP10.93□□□□□ -0.66
C11orf54-215ENST00000617482 HCCSP53701 268 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 OR12D2P58182 307 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 BDH1Q02338 343 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 EXOSC7Q15024 291 aaKnown RBP10.93□□□□□ -0.66
C11orf54-215ENST00000617482 BTBD16Q32M84 506 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 ZNF776Q68DI1 518 aaPredicted RBP10.93□□□□□ -0.66
C11orf54-215ENST00000617482 TIGD3Q6B0B8 471 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 SFXN4Q6P4A7 337 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 ZC3H14Q6PJT7 736 aaKnown RBP10.93□□□□□ -0.66
C11orf54-215ENST00000617482 LYPD8Q6UX82 237 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 LRRC28Q86X40 367 aaPredicted RBP10.93□□□□□ -0.66
C11orf54-215ENST00000617482 CDK20Q8IZL9 346 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 ZNF614Q8N883 585 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 COX18Q8N8Q8 333 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 GRPEL2Q8TAA5 225 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 ABHD4Q8TB40 342 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 AHCYL2Q96HN2 611 aaKnown RBP10.93□□□□□ -0.66
C11orf54-215ENST00000617482 C4orf36Q96KX1 117 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 OR2M4Q96R27 311 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 OR2A5Q96R48 311 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 SERINC2Q96SA4 455 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 NDC1Q9BTX1 674 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 ZNF350Q9GZX5 532 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 PHF11Q9UIL8 331 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 MRPS2Q9Y399 296 aaKnown RBP10.93□□□□□ -0.66
C11orf54-215ENST00000617482 FAM86C2PA6NEL3 165 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 MAGEB4O15481 346 aaPredicted RBP10.93□□□□□ -0.66
C11orf54-215ENST00000617482 ARHGEF9O43307 516 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 KCNJ13O60928 360 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 ZNF780AO75290 641 aaPredicted RBP10.93□□□□□ -0.66
C11orf54-215ENST00000617482 RCBTB2O95199 551 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 C1QBP02746 253 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 MT-ND5P03915 603 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 DBIP07108 87 aaKnown RBP10.93□□□□□ -0.66
C11orf54-215ENST00000617482 THBS1P07996 1170 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 NID1P14543 1247 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 POLR2CP19387 275 aaPredicted RBP10.93□□□□□ -0.66
C11orf54-215ENST00000617482 F8A1P23610 371 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 NDUFS1P28331 727 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 THBS2P35442 1172 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 PITPNBP48739 271 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 ADPRHP54922 357 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 PPP2CBP62714 309 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 PPP2CAP67775 309 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 GPLD1P80108 840 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 SLC25A35Q3KQZ1 300 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 RNASE12Q5GAN4 147 aaKnown RBP10.93□□□□□ -0.66
C11orf54-215ENST00000617482 GHDCQ8N2G8 530 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 TMEM52Q8NDY8 209 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 OR5T3Q8NGG3 340 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 OR13C5Q8NGS8 318 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 OR1E3Q8WZA6 343 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 RFT1Q96AA3 541 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 ABHD1Q96SE0 405 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 ABCG5Q9H222 651 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 FN3KQ9H479 309 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 MEPEQ9NQ76 525 aaPredicted RBP10.93□□□□□ -0.66
C11orf54-215ENST00000617482 CMC2Q9NRP2 79 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 MAT2BQ9NZL9 334 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 ZMIZ1Q9ULJ6 1067 aa10.93□□□□□ -0.66
C11orf54-215ENST00000617482 VCANP13611 3396 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 TRAV6A0A075B6T7 132 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 GXYLT2A0PJZ3 443 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 CDHR4A6H8M9 788 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 C5orf67F2Z3F1 127 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 FGF17O60258 216 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 LYPD3O95274 346 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 POU2F2P09086 479 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 SLC6A1P30531 599 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 PYCR1P32322 319 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 BMP8BP34820 402 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 GABRA3P34903 492 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 CRMP1Q14194 572 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 FAM109BQ6ICB4 259 aaPredicted RBP10.92□□□□□ -0.66
C11orf54-215ENST00000617482 USP53Q70EK8 1073 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 BMP8AQ7Z5Y6 402 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 ZAR1Q86SH2 424 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 SYT9Q86SS6 491 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 SAMD14Q8IZD0 417 aaPredicted RBP10.92□□□□□ -0.66
C11orf54-215ENST00000617482 RNF113BQ8IZP6 322 aaKnown RBP10.92□□□□□ -0.66
C11orf54-215ENST00000617482 ZNF784Q8NCA9 323 aaPredicted RBP10.92□□□□□ -0.66
C11orf54-215ENST00000617482 OR4C6Q8NH72 309 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 NT5CQ8TCD5 201 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 SNAPC3Q92966 411 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 UBL7Q96S82 380 aaPredicted RBP10.92□□□□□ -0.66
C11orf54-215ENST00000617482 GON7Q9BXV9 100 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 GDE1Q9NZC3 331 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 C19orf53Q9UNZ5 99 aaPredicted RBP10.92□□□□□ -0.66
C11orf54-215ENST00000617482 SIGLEC7Q9Y286 467 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 HSPB11Q9Y547 144 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 SLC22A7Q9Y694 548 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 C2orf16Q68DN1 1984 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 A0A0A6YYJ9 748 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 SLC9B1P1A6NJY1 282 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 SLC22A31A6NKX4 558 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 ERVH48-1M5A8F1 160 aa10.92□□□□□ -0.66
C11orf54-215ENST00000617482 PLRG1O43660 514 aaKnown RBP10.92□□□□□ -0.66
C11orf54-215ENST00000617482 PLPP2O43688 288 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms