RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 OR4K14Q8NGD5 310 aa13.46□□□□□ -0.26
SHROOM1-208ENST00000617339 OR51A7Q8NH64 312 aa13.46□□□□□ -0.26
SHROOM1-208ENST00000617339 MCHR1Q99705 422 aa13.46□□□□□ -0.26
SHROOM1-208ENST00000617339 MED20Q9H944 212 aa13.46□□□□□ -0.26
SHROOM1-208ENST00000617339 CLEC4AQ9UMR7 237 aa13.46□□□□□ -0.26
SHROOM1-208ENST00000617339 U3KQ87 197 aa13.46□□□□□ -0.26
SHROOM1-208ENST00000617339 URADA6NGE7 173 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 SLC9B1P1A6NJY1 282 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 PCSK2P16519 638 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 ZNF10P21506 573 aaPredicted RBP13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 TNFRSF4P43489 277 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 GSTM5P46439 218 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 RP1P56715 2156 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 BEST4Q8NFU0 473 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 OR4C15Q8NGM1 316 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 RBM18Q96H35 190 aaKnown RBP13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 KCTD7Q96MP8 289 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 AIFM2Q9BRQ8 373 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 MND1Q9BWT6 205 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 S1PR5Q9H228 398 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 KIR3DX1Q9H7L2 352 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 SEMA4GQ9NTN9 838 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 KLHL28Q9NXS3 571 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 OBP2AQ9NY56 170 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 IQCMA0A1B0GVH7 501 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 FGF17O60258 216 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 IL9P15248 144 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 ST6GAL1P15907 406 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 NAGAP17050 411 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 ABATP80404 500 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 ZNF91Q05481 1191 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 FUT5Q11128 374 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 DUSP5Q16690 384 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 SLC22A18ASQ8N1D0 253 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 OR51L1Q8NGJ5 315 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 TMEM255BQ8WV15 326 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 WDFY2Q96P53 400 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 TMED9Q9BVK6 235 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 RDH8Q9NYR8 311 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 USP36Q9P275 1121 aaKnown RBP13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 AP1M2Q9Y6Q5 423 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 DRD2P14416 443 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 GNSP15586 552 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 PGBD2Q6P3X8 592 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 GPR135Q8IZ08 494 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 ZNF655Q8N720 491 aaPredicted RBP13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 COX18Q8N8Q8 333 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 SRFBP1Q8NEF9 429 aaKnown RBP13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 OR4N2Q8NGD1 307 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 KATNB1Q9BVA0 655 aa13.45□□□□□ -0.26
SHROOM1-208ENST00000617339 PLXNA2O75051 1894 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 RTTNQ86VV8 2226 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 A0A087WUU8 490 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 H3BSH0 61 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 HRKO00198 91 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 EMC8O43402 210 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 AKR1D1P51857 326 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 KCNAB1Q14722 419 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 GXYLT1Q4G148 440 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 FAM122CQ6P4D5 195 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 C19orf48Q6RUI8 117 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 IL20RBQ6UXL0 311 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 LAPTM4BQ86VI4 370 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 NRROSQ86YC3 692 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 ST8SIA2Q92186 375 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 OR6C2Q9NZP2 312 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 A4GNTQ9UNA3 340 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 HEBP2Q9Y5Z4 205 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 MTCH2Q9Y6C9 303 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 A0A0A6YYJ9 748 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 SOX30O94993 753 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 AGFG1P52594 562 aaKnown RBP13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 ZNF155Q12901 538 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 ZIC1Q15915 447 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 NDUFAF6Q330K2 333 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 GARNL3Q5VVW2 1013 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 BHLHB9Q6PI77 547 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 CSNK1A1LQ8N752 337 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 TTLQ8NG68 377 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 OR11H4Q8NGC9 324 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 ZDHHC1Q8WTX9 485 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 MMABQ96EY8 250 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 TRAF4Q9BUZ4 470 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 MS4A7Q9GZW8 240 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 OR51V1Q9H2C8 321 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 PRDM6Q9NQX0 595 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 C2orf92A0A1B0GVN3 265 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 TRIM77I1YAP6 450 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 PAHP00439 452 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 ETV5P41161 510 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 ETV1P50549 477 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 NCF4Q15080 339 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 AANATQ16613 207 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 KLHL22Q53GT1 634 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 C1orf189Q5VU69 101 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 ARSKQ6UWY0 536 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 CFAP77Q6ZQR2 320 aa13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 LRRC25Q8N386 305 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-208ENST00000617339 DEFB123Q8N688 67 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms