RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 ZNF558Q96NG5 402 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 HCFC1R1Q9NWW0 138 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 FAM120CQ9NX05 1096 aaKnown RBP10.78□□□□□ -0.68
TP53-222ENST00000617185 TAS2R5Q9NYW4 299 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 PRUNE2Q8WUY3 3088 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 FFAR2O15552 330 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 IFNGP01579 166 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 CXCL10P02778 98 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 LIMS3P0CW19 117 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 LIMS4P0CW20 117 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 CR2P20023 1033 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 NOS3P29474 1203 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 ZNF140P52738 457 aaPredicted RBP10.78□□□□□ -0.68
TP53-222ENST00000617185 HCCSP53701 268 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 CRB2Q5IJ48 1285 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 GAREM2Q75VX8 874 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 CLDN19Q8N6F1 224 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 FATE1Q969F0 183 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 MEGF10Q96KG7 1140 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 BOCQ9BWV1 1114 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 PBX4Q9BYU1 374 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 TLNRD1Q9H1K6 362 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 CTPS2Q9NRF8 586 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 PCDHB10Q9UN67 800 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 INSL5Q9Y5Q6 135 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 PIAS3Q9Y6X2 628 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 NEDD8-MDP1E9PL57 170 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 GSTZ1O43708 216 aaPredicted RBP10.78□□□□□ -0.68
TP53-222ENST00000617185 PCDH7O60245 1069 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 EIF4E2O60573 245 aaKnown RBP10.78□□□□□ -0.68
TP53-222ENST00000617185 F11P03951 625 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 CTSOP43234 321 aaPredicted RBP10.78□□□□□ -0.68
TP53-222ENST00000617185 AKR1C2P52895 323 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 WNT3P56703 355 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 AKR1C1Q04828 323 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 ELFN2Q5R3F8 820 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 FAM111BQ6SJ93 734 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 CLECL1Q8IZS7 167 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 SLC39A11Q8N1S5 342 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 C15orf54Q8N8G6 183 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 BOLLQ8N9W6 283 aaKnown RBP10.78□□□□□ -0.68
TP53-222ENST00000617185 ZNF485Q8NCK3 441 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 OR51Q1Q8NH59 317 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 WNT2BQ93097 391 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 SLC25A28Q96A46 364 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 NTMT1Q9BV86 223 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 POLR2J3Q9H1A7 115 aaKnown RBP10.78□□□□□ -0.68
TP53-222ENST00000617185 RHCGQ9UBD6 479 aa10.78□□□□□ -0.68
TP53-222ENST00000617185 NAP1L6A6NFF2 107 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 FAM227AF5H4B4 570 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 GFYI3L273 518 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 TCAPO15273 167 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 IGHV2-5P01817 119 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 IL5P05113 134 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 RB1P06400 928 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 HEXBP07686 556 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 IDSP22304 550 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 RPL3P39023 403 aaKnown RBP10.77□□□□□ -0.69
TP53-222ENST00000617185 ARMC12Q5T9G4 340 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 NAGSQ8N159 534 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 C2orf15Q8WU43 125 aaKnown RBP10.77□□□□□ -0.69
TP53-222ENST00000617185 ACOT11Q8WXI4 607 aaPredicted RBP10.77□□□□□ -0.69
TP53-222ENST00000617185 THAP4Q8WY91 577 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 FBXO17Q96EF6 278 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 RHOVQ96L33 236 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 PTGFRNQ9P2B2 879 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 CCL26Q9Y258 94 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 LOC730098B7Z3J9 87 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 KIAA0355O15063 1070 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 CCL16O15467 120 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 TGM5O43548 720 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 RGS9O75916 674 aaPredicted RBP10.77□□□□□ -0.69
TP53-222ENST00000617185 AGAP20933 346 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 ACHEP22303 614 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 ITGA3P26006 1051 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 GDNFP39905 211 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 CCR9P51686 369 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 PPIAP62937 165 aaKnown RBP10.77□□□□□ -0.69
TP53-222ENST00000617185 PRR5P85299 388 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 ACSM1Q08AH1 577 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 SFXN4Q6P4A7 337 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 DPPA2Q7Z7J5 298 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 FBXO15Q8NCQ5 510 aaPredicted RBP10.77□□□□□ -0.69
TP53-222ENST00000617185 SMAP2Q8WU79 429 aaPredicted RBP10.77□□□□□ -0.69
TP53-222ENST00000617185 THEM6Q8WUY1 208 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 PLD4Q96BZ4 506 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 ZNF354BQ96LW1 612 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 SEC11CQ9BY50 192 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 FAM117AQ9C073 453 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 NOX3Q9HBY0 568 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 DZANK1Q9NVP4 752 aa10.77□□□□□ -0.69
TP53-222ENST00000617185 NLE1Q9NVX2 485 aaPredicted RBP10.77□□□□□ -0.69
TP53-222ENST00000617185 GSAPA4D1B5 854 aa10.76□□□□□ -0.69
TP53-222ENST00000617185 OR14I1A6ND48 311 aa10.76□□□□□ -0.69
TP53-222ENST00000617185 MCIDASD6RGH6 385 aa10.76□□□□□ -0.69
TP53-222ENST00000617185 CLDN4O14493 209 aa10.76□□□□□ -0.69
TP53-222ENST00000617185 GUCA1CO95843 209 aa10.76□□□□□ -0.69
TP53-222ENST00000617185 OR8U8P0C7N1 319 aa10.76□□□□□ -0.69
TP53-222ENST00000617185 COX7A2P14406 83 aa10.76□□□□□ -0.69
TP53-222ENST00000617185 ANXA7P20073 488 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms