RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 TMEM41BQ5BJD5 291 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 TMEM150AQ86TG1 271 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 NIPA2Q8N8Q9 360 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 SMAP2Q8WU79 429 aaPredicted RBP11.9□□□□□ -0.5
TCF4-248ENST00000616053 TRUB1Q8WWH5 349 aaKnown RBP11.9□□□□□ -0.5
TCF4-248ENST00000616053 AURKBQ96GD4 344 aaPredicted RBP11.9□□□□□ -0.5
TCF4-248ENST00000616053 MENTQ9BUN1 341 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 ARL6Q9H0F7 186 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 TCEAL2Q9H3H9 227 aaPredicted RBP11.9□□□□□ -0.5
TCF4-248ENST00000616053 PRAMEF4O60810 478 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 DIRAS1O95057 198 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 SCGB1D1O95968 90 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 TLDC1Q6P9B6 456 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 DNAJC22Q8N4W6 341 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 OR6T1Q8NGN1 323 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 SLC17A7Q9P2U7 560 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 PRSS51A0A1B0GVH4 220 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 A0A1W2PS29 197 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 G3V3Y1 287 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 AHSGP02765 367 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 TRAPPC2P0DI81 140 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 TRAPPC2BP0DI82 140 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 C1GALT1C1LP0DN25 315 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 CDC34P49427 236 aaPredicted RBP11.9□□□□□ -0.5
TCF4-248ENST00000616053 HADHBP55084 474 aaKnown RBP11.9□□□□□ -0.5
TCF4-248ENST00000616053 LBX2Q6XYB7 198 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 C14orf80Q86SX3 495 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 ZNF679Q8IYX0 411 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 SUMF2Q8NBJ7 301 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 PYURFQ96I23 114 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 CTRCQ99895 268 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 VN1R3Q9BXE9 311 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 IL17RBQ9NRM6 502 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 FAM171A2A8MVW0 826 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 CHRNB2P17787 502 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 CYB561P49447 251 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 MRPS34P82930 218 aaKnown RBP11.9□□□□□ -0.5
TCF4-248ENST00000616053 KIAA0930Q6ICG6 404 aaPredicted RBP11.9□□□□□ -0.5
TCF4-248ENST00000616053 PLXDC2Q6UX71 529 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 ZDHHC14Q8IZN3 488 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 GTPBP8Q8N3Z3 284 aaPredicted RBP11.9□□□□□ -0.5
TCF4-248ENST00000616053 RDH12Q96NR8 316 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 CPPED1Q9BRF8 314 aaPredicted RBP11.9□□□□□ -0.5
TCF4-248ENST00000616053 DHX33Q9H6R0 707 aaKnown RBP11.9□□□□□ -0.5
TCF4-248ENST00000616053 TAS2R8Q9NYW2 309 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 ADAMTS12P58397 1594 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 ADGRL2O95490 1459 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 C1orf167Q5SNV9 1468 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 RAB6AP20340 208 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 PHC1P78364 1004 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 MEP1AQ16819 746 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 PAGE3Q5JUK9 113 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 DEFB108BQ8NET1 73 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 STON2Q8WXE9 905 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 NUDT22Q9BRQ3 303 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 RNF17Q9BXT8 1623 aaKnown RBP11.9□□□□□ -0.5
TCF4-248ENST00000616053 SLC9B1P1A6NJY1 282 aa11.9□□□□□ -0.51
TCF4-248ENST00000616053 EDF1O60869 148 aaKnown RBP11.9□□□□□ -0.51
TCF4-248ENST00000616053 SOCS5O75159 536 aa11.9□□□□□ -0.51
TCF4-248ENST00000616053 KCNK2O95069 426 aa11.9□□□□□ -0.51
TCF4-248ENST00000616053 UBE2IP63279 158 aaKnown RBP11.9□□□□□ -0.51
TCF4-248ENST00000616053 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.9□□□□□ -0.51
TCF4-248ENST00000616053 SYT6Q5T7P8 510 aaPredicted RBP11.9□□□□□ -0.51
TCF4-248ENST00000616053 SLC39A5Q6ZMH5 540 aa11.9□□□□□ -0.51
TCF4-248ENST00000616053 ZNF546Q86UE3 836 aa11.9□□□□□ -0.51
TCF4-248ENST00000616053 HS3ST5Q8IZT8 346 aa11.9□□□□□ -0.51
TCF4-248ENST00000616053 C1orf127Q8N9H9 656 aa11.9□□□□□ -0.51
TCF4-248ENST00000616053 HSD17B11Q8NBQ5 300 aa11.9□□□□□ -0.51
TCF4-248ENST00000616053 OR4F6Q8NGB9 312 aa11.9□□□□□ -0.51
TCF4-248ENST00000616053 C7orf26Q96N11 449 aa11.9□□□□□ -0.51
TCF4-248ENST00000616053 BCO1Q9HAY6 547 aa11.9□□□□□ -0.51
TCF4-248ENST00000616053 A0A0U1RQF3 1178 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 FAM90A27PA6NNH2 459 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 ANHXE9PGG2 379 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 H3BNX3 289 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 HAPLN1P10915 354 aaPredicted RBP11.89□□□□□ -0.51
TCF4-248ENST00000616053 HTN1P15515 57 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 RTL8BQ17RB0 113 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 ARHGAP11BQ3KRB8 267 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 TECPR1Q7Z6L1 1165 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 RBM12BQ8IXT5 1001 aaKnown RBP11.89□□□□□ -0.51
TCF4-248ENST00000616053 EXD3Q8N9H8 876 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 CHFRQ96EP1 664 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 ARHGAP39Q9C0H5 1083 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 NOX3Q9HBY0 568 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 DUSP22Q9NRW4 184 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 SQORQ9Y6N5 450 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 MPDZO75970 2070 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 C14orf28Q4W4Y0 310 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 OGFOD3Q6PK18 319 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 DTWD1Q8N5C7 304 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 RPL3LQ92901 407 aaKnown RBP11.89□□□□□ -0.51
TCF4-248ENST00000616053 OR11A1Q9GZK7 315 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 DCSTAMPQ9H295 470 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 CD8BP10966 210 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 TUBA3CQ13748 450 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 APOFQ13790 326 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 GPR176Q14439 515 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 TMEM176BQ3YBM2 270 aaPredicted RBP11.89□□□□□ -0.51
TCF4-248ENST00000616053 ADIPOR2Q86V24 386 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms