RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 GABRA5P31644 462 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 RBMXP38159 391 aaKnown RBP13.78□□□□□ -0.2
SNPH-203ENST00000614659 HTR3AP46098 478 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 NKX3-2P78367 333 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 MALLQ13021 153 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 LRRC28Q86X40 367 aaPredicted RBP13.78□□□□□ -0.2
SNPH-203ENST00000614659 TMEM151AQ8N4L1 468 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 ZNF565Q8N9K5 539 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 ULBP3Q9BZM4 244 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 ARL6Q9H0F7 186 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 WNT16Q9UBV4 365 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 MCTS1Q9ULC4 181 aaKnown RBP13.78□□□□□ -0.2
SNPH-203ENST00000614659 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 BORCS7-ASMTA0A0B4J1R7 106 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 CSF1P09603 554 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 CTXN1P60606 82 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 HERV-K104P61576 105 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 ZNF91Q05481 1191 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 DUS1LQ6P1R4 473 aaKnown RBP13.78□□□□□ -0.2
SNPH-203ENST00000614659 PARP16Q8N5Y8 322 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 CLDN22Q8N7P3 220 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 GATSQ8NAP1 163 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 WDR20Q8TBZ3 569 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 SORBS1Q9BX66 1292 aaKnown RBP13.78□□□□□ -0.2
SNPH-203ENST00000614659 SAV1Q9H4B6 383 aaPredicted RBP13.78□□□□□ -0.2
SNPH-203ENST00000614659 SRA1Q9HD15 236 aaKnown RBP13.78□□□□□ -0.2
SNPH-203ENST00000614659 PTTG3PQ9NZH4 202 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 CLEC4EQ9ULY5 219 aa13.78□□□□□ -0.2
SNPH-203ENST00000614659 GPR39O43194 453 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 MRPL19P49406 292 aaKnown RBP13.77□□□□□ -0.2
SNPH-203ENST00000614659 PFN3P60673 137 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 ALG10Q5BKT4 473 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 ENTPD8Q5MY95 495 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 BPHLQ86WA6 291 aaPredicted RBP13.77□□□□□ -0.2
SNPH-203ENST00000614659 OR5D16Q8NGK9 328 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 OR8S1Q8NH09 359 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 CDS1Q92903 461 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 RGCCQ9H4X1 137 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 CCL26Q9Y258 94 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 ZNF337Q9Y3M9 751 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 CBLP22681 906 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 TACR1P25103 407 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 C9orf50Q5SZB4 431 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 ZNF704Q6ZNC4 412 aaPredicted RBP13.77□□□□□ -0.2
SNPH-203ENST00000614659 SLC46A3Q7Z3Q1 461 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 KCTD20Q7Z5Y7 419 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 HMGN2P46Q86SG4 172 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 OR14A16Q8NHC5 309 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 BPIFA2Q96DR5 249 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 NEDD4LQ96PU5 975 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 TTTY10Q9BZA0 68 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 SLAMF7Q9NQ25 335 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 GSKIPQ9P0R6 139 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 FBXL3Q9UKT7 428 aa13.77□□□□□ -0.2
SNPH-203ENST00000614659 DIMT1Q9UNQ2 313 aaKnown RBP13.77□□□□□ -0.2
SNPH-203ENST00000614659 SCRG1O75711 98 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 C6orf132Q5T0Z8 1188 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 BCL2L15Q5TBC7 163 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 SPATC1Q76KD6 591 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 CUTCQ9NTM9 273 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 BABAM2Q9NXR7 383 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 NLKQ9UBE8 527 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 TCN2P20062 427 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 DAP3P51398 398 aaKnown RBP13.77□□□□□ -0.21
SNPH-203ENST00000614659 HSD11B2P80365 405 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 TNFRSF17Q02223 184 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 CHAF1BQ13112 559 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 FAM71E1Q6IPT2 247 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 OR52D1Q9H346 318 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 TMEM9BQ9NQ34 198 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 ACAD8Q9UKU7 415 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.77□□□□□ -0.21
SNPH-203ENST00000614659 PIPP12273 146 aaPredicted RBP13.77□□□□□ -0.21
SNPH-203ENST00000614659 HMGA1P17096 107 aaKnown RBP13.77□□□□□ -0.21
SNPH-203ENST00000614659 GIPRP48546 466 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 SNRPGP62308 76 aaKnown RBP13.77□□□□□ -0.21
SNPH-203ENST00000614659 ODF4Q2M2E3 257 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 CCDC58Q4VC31 144 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 AGAP6Q5VW22 663 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 FAM198BQ6UWH4 519 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 AGAP4Q96P64 663 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 KCNIP3Q9Y2W7 256 aa13.77□□□□□ -0.21
SNPH-203ENST00000614659 C17orf105B2RV13 164 aa13.76□□□□□ -0.21
SNPH-203ENST00000614659 IRF2P14316 349 aa13.76□□□□□ -0.21
SNPH-203ENST00000614659 PRKAR1BP31321 381 aa13.76□□□□□ -0.21
SNPH-203ENST00000614659 CHRFAM7AQ494W8 412 aa13.76□□□□□ -0.21
SNPH-203ENST00000614659 ZNF761Q86XN6 746 aaPredicted RBP13.76□□□□□ -0.21
SNPH-203ENST00000614659 ZNF595Q8IYB9 648 aa13.76□□□□□ -0.21
SNPH-203ENST00000614659 THAP3Q8WTV1 239 aaPredicted RBP13.76□□□□□ -0.21
SNPH-203ENST00000614659 UCN3Q969E3 161 aa13.76□□□□□ -0.21
SNPH-203ENST00000614659 TREX2Q9BQ50 279 aaPredicted RBP13.76□□□□□ -0.21
SNPH-203ENST00000614659 KCNN3Q9UGI6 736 aa13.76□□□□□ -0.21
SNPH-203ENST00000614659 GPRIN2O60269 458 aa13.76□□□□□ -0.21
SNPH-203ENST00000614659 GPR75O95800 540 aa13.76□□□□□ -0.21
SNPH-203ENST00000614659 PLATP00750 562 aa13.76□□□□□ -0.21
SNPH-203ENST00000614659 PTNP21246 168 aa13.76□□□□□ -0.21
SNPH-203ENST00000614659 TPMTP51580 245 aa13.76□□□□□ -0.21
SNPH-203ENST00000614659 CSNK2A1P68400 391 aaPredicted RBP13.76□□□□□ -0.21
SNPH-203ENST00000614659 COL28A1Q2UY09 1125 aa13.76□□□□□ -0.21
SNPH-203ENST00000614659 GPR139Q6DWJ6 353 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms