RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 CDC40O60508 579 aaKnown RBP eCLIP13.36□□□□□ -0.27
CD48-203ENST00000613788 ADAM11O75078 769 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 TRAPPC6AO75865 159 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 SEMG1P04279 462 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 FABP3P05413 133 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 RFPL3SP0C7P2 107 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 GP1BBP13224 206 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 SRD5A2P31213 254 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 RFC3P40938 356 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 IDH2P48735 452 aaKnown RBP13.36□□□□□ -0.27
CD48-203ENST00000613788 ERFP50548 548 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 HOXC5Q00444 222 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 LY6DQ14210 128 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 GLYR1Q49A26 553 aaPredicted RBP13.36□□□□□ -0.27
CD48-203ENST00000613788 WBP2NLQ6ICG8 309 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 DEF8Q6ZN54 512 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 CYP4Z1Q86W10 505 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 RBM45Q8IUH3 476 aaKnown RBP13.36□□□□□ -0.27
CD48-203ENST00000613788 ZDHHC21Q8IVQ6 265 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 TMEM251Q8N6I4 163 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 LSMEM1Q8N8F7 131 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 ST8SIA1Q92185 356 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 C7orf34Q96L11 122 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 AMBRA1Q9C0C7 1298 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 UBQLN3Q9H347 655 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 YY1AP1Q9H869 796 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 CCM2LQ9NUG4 571 aaPredicted RBP13.36□□□□□ -0.27
CD48-203ENST00000613788 TAS2R10Q9NYW0 307 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 RPS6KB2Q9UBS0 482 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 HRH3Q9Y5N1 445 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 ENPP4Q9Y6X5 453 aa13.36□□□□□ -0.27
CD48-203ENST00000613788 FAM166BA8MTA8 275 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 B4DXG7 233 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 TPST2O60704 377 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 CRYABP02511 175 aaKnown RBP13.35□□□□□ -0.27
CD48-203ENST00000613788 ZNF24P17028 368 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 SLC7A1P30825 629 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 EIF1P41567 113 aaKnown RBP13.35□□□□□ -0.27
CD48-203ENST00000613788 SLC10A1Q14973 349 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 QPRTQ15274 297 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 NPTX1Q15818 432 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 ENTPD8Q5MY95 495 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 ARSKQ6UWY0 536 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 CADM2Q8N3J6 435 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 FAM109AQ8N4B1 249 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 NR4A3Q92570 626 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 ZBTB8AQ96BR9 441 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 DUS3LQ96G46 650 aaKnown RBP13.35□□□□□ -0.27
CD48-203ENST00000613788 UBL7Q96S82 380 aaPredicted RBP13.35□□□□□ -0.27
CD48-203ENST00000613788 ZNF347Q96SE7 839 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 ZNF703Q9H7S9 590 aaPredicted RBP13.35□□□□□ -0.27
CD48-203ENST00000613788 MED17Q9NVC6 651 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 VDAC3Q9Y277 283 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 MAP1BP46821 2468 aaKnown RBP13.35□□□□□ -0.27
CD48-203ENST00000613788 NINQ8N4C6 2090 aa13.35□□□□□ -0.27
CD48-203ENST00000613788 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 hCG_2039718K7EN88 272 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 TFECO14948 347 aaPredicted RBP13.34□□□□□ -0.27
CD48-203ENST00000613788 ZIC3O60481 467 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 HPNP05981 417 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 RHCEP18577 417 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 HK1P19367 917 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 ADH6P28332 368 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 SLC1A3P43003 542 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 MAGEA5P43359 124 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 HTR3AP46098 478 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 SESN3P58005 492 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 TAS2R41P59536 307 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 VLDLRP98155 873 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 PMP22Q01453 160 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 OR1Q1Q15612 314 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 TOMM34Q15785 309 aaPredicted RBP13.34□□□□□ -0.27
CD48-203ENST00000613788 PLPPR5Q32ZL2 321 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 ZFP1Q6P2D0 407 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 ZNF613Q6PF04 617 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 PCSK4Q6UW60 755 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 PLEKHM3Q6ZWE6 761 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 PIWIL3Q7Z3Z3 882 aaKnown RBP13.34□□□□□ -0.27
CD48-203ENST00000613788 LSM14AQ8ND56 463 aaKnown RBP13.34□□□□□ -0.27
CD48-203ENST00000613788 PAPD5Q8NDF8 572 aaKnown RBP13.34□□□□□ -0.27
CD48-203ENST00000613788 OR14L1PQ8NHC6 308 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 DNAJA4Q8WW22 397 aaPredicted RBP13.34□□□□□ -0.27
CD48-203ENST00000613788 SLC39A7Q92504 469 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 MRGPRX4Q96LA9 322 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 ZNF300Q96RE9 604 aaPredicted RBP13.34□□□□□ -0.27
CD48-203ENST00000613788 PRR14Q9BWN1 585 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 CHID1Q9BWS9 393 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 ACER3Q9NUN7 267 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 SELENONQ9NZV5 590 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 NDUFAF4Q9P032 175 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 CACNA1GO43497 2377 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 EML6Q6ZMW3 1958 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 ATMQ13315 3056 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 C7orf72A4D263 438 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 TRAPPC13A5PLN9 417 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 CPSF4LA6NMK7 179 aaKnown RBP13.34□□□□□ -0.27
CD48-203ENST00000613788 ETV2O00321 342 aaPredicted RBP13.34□□□□□ -0.27
CD48-203ENST00000613788 PRKCAP17252 672 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 HTR2AP28223 471 aa13.34□□□□□ -0.27
CD48-203ENST00000613788 MAGEA2P43356 314 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms