RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ARSGQ96EG1 525 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 GMPPAQ96IJ6 420 aaPredicted RBP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 LURAP1Q96LR2 239 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 INPP5KQ9BT40 448 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 THUMPD3Q9BV44 507 aaKnown RBP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 SERHL2Q9H4I8 314 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 TMEM185BQ9H7F4 350 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 MTHFD2LQ9H903 347 aaPredicted RBP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 RNF122Q9H9V4 155 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 ZNF232Q9UNY5 417 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 CORO2BQ9UQ03 480 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 L3MBTL1Q9Y468 752 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 INTS1Q8N201 2190 aaKnown RBP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 B4DXG7 233 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 C5orf58C9J3I9 102 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 HMGN4O00479 90 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 NR5A2O00482 541 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 ZNF195O14628 629 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 CXCL13O43927 109 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 DBIP07108 87 aaKnown RBP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 TROVE2P10155 538 aaKnown RBP eCLIP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 PRKCAP17252 672 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 NCF2P19878 526 aaPredicted RBP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 HTR3AP46098 478 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 KCNJ10P78508 379 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 FOXF2Q12947 444 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 SQLEQ14534 574 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 LARS2Q15031 903 aaKnown RBP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 RNPS1Q15287 305 aaKnown RBP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 TYW3Q6IPR3 259 aaKnown RBP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 CBLN3Q6UW01 205 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 FAM214BQ7L5A3 538 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 MAVSQ7Z434 540 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 GGNQ86UU5 652 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 ZZZ3Q8IYH5 903 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 ZNF440Q8IYI8 595 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 GPR119Q8TDV5 335 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 ZFP90Q8TF47 636 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 FIG4Q92562 907 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 OSTF1Q92882 214 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 ZHX1-C8orf76Q96EF9 292 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 TACO1Q9BSH4 297 aaKnown RBP11.09□□□□□ -0.63
CBWD3-208ENST00000612050 SAP130Q9H0E3 1048 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 TPT1P8Q9HAU6 139 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 ELOVL5Q9NYP7 299 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 CCDC167Q9P0B6 97 aa11.09□□□□□ -0.63
CBWD3-208ENST00000612050 EVPLLA8MZ36 301 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 ADAMDEC1O15204 470 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 POU2F1P14859 743 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 APOBEC1P41238 236 aaKnown RBP11.08□□□□□ -0.64
CBWD3-208ENST00000612050 CDKN2CP42773 168 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 MRPL19P49406 292 aaKnown RBP11.08□□□□□ -0.64
CBWD3-208ENST00000612050 RNF144AP50876 292 aaPredicted RBP11.08□□□□□ -0.64
CBWD3-208ENST00000612050 ATP4BP51164 291 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 CSNK2A1P68400 391 aaPredicted RBP11.08□□□□□ -0.64
CBWD3-208ENST00000612050 CHRNEQ04844 493 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 MERTKQ12866 999 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 FADDQ13158 208 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 TMEM176BQ3YBM2 270 aaPredicted RBP11.08□□□□□ -0.64
CBWD3-208ENST00000612050 LIN52Q52LA3 116 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 TMEM201Q5SNT2 666 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 FRRS1Q6ZNA5 592 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 ZNF295-AS1Q8N0V1 137 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 SLC43A2Q8N370 569 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 OR9I1Q8NGQ6 314 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 OR6K3Q8NGY3 331 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 STON2Q8WXE9 905 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 VPS33AQ96AX1 596 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 SPDL1Q96EA4 605 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 POLDIP3Q9BY77 421 aaKnown RBP11.08□□□□□ -0.64
CBWD3-208ENST00000612050 EXOSC3Q9NQT5 275 aaKnown RBP11.08□□□□□ -0.64
CBWD3-208ENST00000612050 GALNT8Q9NY28 637 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 JKAMPQ9P055 326 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 PRDM4Q9UKN5 801 aa11.08□□□□□ -0.64
CBWD3-208ENST00000612050 PCNX3Q9H6A9 2034 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 A8MXE2 369 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 H0YC42 278 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 CLIC1O00299 241 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 OPN1LWP04000 364 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 BCHEP06276 602 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 TFPIP10646 304 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 CD8BP10966 210 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 EPXP11678 715 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 RYKP34925 604 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 TPD52P55327 224 aaPredicted RBP11.07□□□□□ -0.64
CBWD3-208ENST00000612050 DLX5P56178 289 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 COPZ1P61923 177 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 SKP2Q13309 424 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 SYPL1Q16563 259 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 NDUFAF6Q330K2 333 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 AGKQ53H12 422 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 SLC25A53Q5H9E4 307 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 POMZP3Q6PJE2 187 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 PLXDC2Q6UX71 529 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 GRINAQ7Z429 371 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 EBF4Q9BQW3 602 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 NPHS2Q9NP85 383 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 DNAJB12Q9NXW2 375 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms