RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 CXCL12P48061 93 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 RFX3P48380 749 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 SLC9A3P48764 834 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 CSNK1EP49674 416 aaKnown RBP11.02□□□□□ -0.65
USP6NL-206ENST00000609853 RUNX1T1Q06455 604 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 GPR50Q13585 617 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 KRR1Q13601 381 aaKnown RBP11.02□□□□□ -0.65
USP6NL-206ENST00000609853 ALG10BQ5I7T1 473 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 PAQR6Q6TCH4 344 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 TMPRSS11AQ6ZMR5 421 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 QSOX2Q6ZRP7 698 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 BTLAQ7Z6A9 289 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 CPOQ8IVL8 374 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 D2HGDHQ8N465 521 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 BCORP1Q8N888 145 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 ZNF527Q8NB42 609 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 DRAXINQ8NBI3 349 aaPredicted RBP11.02□□□□□ -0.65
USP6NL-206ENST00000609853 ZNF485Q8NCK3 441 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 OR4N2Q8NGD1 307 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 OR4C6Q8NH72 309 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 PFN4Q8NHR9 129 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 SLC2A12Q8TD20 617 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 SLC19A3Q9BZV2 496 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 RNF167Q9H6Y7 350 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 HINT3Q9NQE9 182 aaKnown RBP11.02□□□□□ -0.65
USP6NL-206ENST00000609853 LANCL2Q9NS86 450 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 FLRT3Q9NZU0 649 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 CAB39Q9Y376 341 aaPredicted RBP11.02□□□□□ -0.65
USP6NL-206ENST00000609853 MN1Q10571 1320 aaPredicted RBP11.02□□□□□ -0.65
USP6NL-206ENST00000609853 RIIAD1A6NNX1 92 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 C17orf105B2RV13 164 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 J3QRE1 110 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 HRKO00198 91 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 IFNGP01579 166 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 SLC6A6P31641 620 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 RORAP35398 523 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 PPICP45877 212 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 PGDP52209 483 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 FXYD6P3P58550 94 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 DCAF7P61962 342 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 FOXK2Q01167 660 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 COL9A2Q14055 689 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-206ENST00000609853 DOC2BQ14184 412 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 ERV3-1Q14264 604 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 KLHL26Q53HC5 615 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 NIPAL3Q6P499 406 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 ZC3H14Q6PJT7 736 aaKnown RBP11.01□□□□□ -0.65
USP6NL-206ENST00000609853 CD200R1LQ6Q8B3 271 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 WDR74Q6RFH5 385 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-206ENST00000609853 PRSS42Q7Z5A4 293 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 OAFQ86UD1 273 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 GPR135Q8IZ08 494 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 ACBD7Q8N6N7 88 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 GRHL3Q8TE85 626 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 SENP5Q96HI0 755 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-206ENST00000609853 KCTD7Q96MP8 289 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 PTCHD1Q96NR3 888 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 IFT27Q9BW83 186 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 TBC1D17Q9HA65 648 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 MKKSQ9NPJ1 570 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-206ENST00000609853 ATP13A2Q9NQ11 1180 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 MEPEQ9NQ76 525 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-206ENST00000609853 UBQLN4Q9NRR5 601 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 UCKL1Q9NWZ5 548 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 TXNL4BQ9NX01 149 aaKnown RBP11.01□□□□□ -0.65
USP6NL-206ENST00000609853 DTX4Q9Y2E6 619 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 CARD8Q9Y2G2 431 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 EML5Q05BV3 1969 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 NUP210LQ5VU65 1888 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 IQCMA0A1B0GVH7 501 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 TRDV1A0A1B0GX56 115 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 PRR23D1E9PI22 279 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-206ENST00000609853 TOX3O15405 576 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-206ENST00000609853 MAGEB3O15480 346 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 SDC3O75056 442 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 CSTAP01040 98 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 PRR23D2P0DMB1 279 aaPredicted RBP11.01□□□□□ -0.65
USP6NL-206ENST00000609853 PEPDP12955 493 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 ZNF3P17036 446 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 HK1P19367 917 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 RPS19P39019 145 aaKnown RBP11.01□□□□□ -0.65
USP6NL-206ENST00000609853 OR1D5P58170 312 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 POU4F2Q12837 409 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 NKAIN2Q5VXU1 208 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 ARHGAP11AQ6P4F7 1023 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 MAMSTRQ6ZN01 415 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 PLEKHG7Q6ZR37 379 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 TTLL10Q6ZVT0 673 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 ZNF554Q86TJ5 538 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 CCDC190Q86UF4 302 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 C11orf74Q86VG3 221 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 UBALD2Q8IYN6 164 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 CACTIN-AS1Q8N1I8 211 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 OR13C2Q8NGS9 318 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 GATAD2BQ8WXI9 593 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 TM9SF4Q92544 642 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 SLC25A46Q96AG3 418 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 SLC41A2Q96JW4 573 aa11.01□□□□□ -0.65
USP6NL-206ENST00000609853 ART5Q96L15 291 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms