RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CNOT9Q92600 299 aaKnown RBP12.9□□□□□ -0.34
CTSA-219ENST00000607841 SLC35B4Q969S0 331 aa12.9□□□□□ -0.34
CTSA-219ENST00000607841 WDYHV1Q96HA8 205 aa12.9□□□□□ -0.34
CTSA-219ENST00000607841 NSL1Q96IY1 281 aa12.9□□□□□ -0.34
CTSA-219ENST00000607841 ZNF583Q96ND8 569 aa12.9□□□□□ -0.34
CTSA-219ENST00000607841 VKORC1Q9BQB6 163 aa12.9□□□□□ -0.34
CTSA-219ENST00000607841 EVA1AQ9H8M9 152 aa12.9□□□□□ -0.34
CTSA-219ENST00000607841 SPAG4Q9NPE6 437 aa12.9□□□□□ -0.34
CTSA-219ENST00000607841 ARL8BQ9NVJ2 186 aa12.9□□□□□ -0.34
CTSA-219ENST00000607841 RLIMQ9NVW2 624 aa12.9□□□□□ -0.34
CTSA-219ENST00000607841 CMTM6Q9NX76 183 aa12.9□□□□□ -0.34
CTSA-219ENST00000607841 KLHL28Q9NXS3 571 aa12.9□□□□□ -0.34
CTSA-219ENST00000607841 DNAJB12Q9NXW2 375 aaKnown RBP12.9□□□□□ -0.34
CTSA-219ENST00000607841 CAMK2AQ9UQM7 478 aa12.9□□□□□ -0.34
CTSA-219ENST00000607841 MEMO1Q9Y316 297 aa12.9□□□□□ -0.34
CTSA-219ENST00000607841 ZNF337Q9Y3M9 751 aa12.9□□□□□ -0.34
CTSA-219ENST00000607841 NINQ8N4C6 2090 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 FLNBO75369 2602 aaKnown RBP12.89□□□□□ -0.35
CTSA-219ENST00000607841 ELOVL7A1L3X0 281 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 H3BML4 177 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 M0QX08 132 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 AGFG2O95081 481 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 IFNA14P01570 189 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 PRKCAP17252 672 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 ME2P23368 584 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 ELK4P28324 431 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 RYKP34925 604 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 STARP49675 285 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 LHX2P50458 406 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 SLC7A2P52569 658 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 PCBP3P57721 371 aaKnown RBP12.89□□□□□ -0.35
CTSA-219ENST00000607841 COPZ1P61923 177 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 RAC1P63000 192 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 MXRA7P84157 204 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 EMC4Q5J8M3 183 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 DHRS4L2Q6PKH6 230 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 C16orf89Q6UX73 402 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 CHMP1BQ7LBR1 199 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 ULK2Q8IYT8 1036 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 FBXO27Q8NI29 283 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 ZPLD1Q8TCW7 415 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 SLC26A7Q8TE54 656 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 RNF145Q96MT1 663 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 PINK1Q9BXM7 581 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 SERINC1Q9NRX5 453 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 ACER3Q9NUN7 267 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 EML6Q6ZMW3 1958 aa12.89□□□□□ -0.35
CTSA-219ENST00000607841 HELZ2Q9BYK8 2649 aaKnown RBP12.88□□□□□ -0.35
CTSA-219ENST00000607841 CCT8L1PA6NM43 557 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 GJE1A6NN92 205 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 SHISA8B8ZZ34 492 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 H0Y3Z8 333 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 ETV2O00321 342 aaPredicted RBP12.88□□□□□ -0.35
CTSA-219ENST00000607841 FAAHO00519 579 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 BCAS1O75363 584 aaPredicted RBP12.88□□□□□ -0.35
CTSA-219ENST00000607841 MFN2O95140 757 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 GP1BBP13224 206 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 ZNF708P17019 499 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 CALB2P22676 271 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 HTR3AP46098 478 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 IDH2P48735 452 aaKnown RBP12.88□□□□□ -0.35
CTSA-219ENST00000607841 SESN3P58005 492 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 SRYQ05066 204 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 LIPEQ05469 1076 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 EPS8Q12929 822 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 FOXF1Q12946 379 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 TOMM34Q15785 309 aaPredicted RBP12.88□□□□□ -0.35
CTSA-219ENST00000607841 SLC25A53Q5H9E4 307 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 DCST1Q5T197 706 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 C1orf185Q5T7R7 199 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 B3GNT6Q6ZMB0 384 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 CCDC80Q76M96 950 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 TRPM8Q7Z2W7 1104 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 GRINAQ7Z429 371 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 MICU2Q8IYU8 434 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 PGAM4Q8N0Y7 254 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 CLIP4Q8N3C7 705 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 TNIP2Q8NFZ5 429 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 POC1BQ8TC44 478 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 PHF10Q8WUB8 498 aaKnown RBP12.88□□□□□ -0.35
CTSA-219ENST00000607841 ALG2Q9H553 416 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 ADA2Q9NZK5 511 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 ABCD2Q9UBJ2 740 aa12.88□□□□□ -0.35
CTSA-219ENST00000607841 ERRFI1Q9UJM3 462 aaPredicted RBP12.88□□□□□ -0.35
CTSA-219ENST00000607841 PRRC2CQ9Y520 2896 aaKnown RBP12.88□□□□□ -0.35
CTSA-219ENST00000607841 NME4O00746 187 aa12.87□□□□□ -0.35
CTSA-219ENST00000607841 SEMA7AO75326 666 aa12.87□□□□□ -0.35
CTSA-219ENST00000607841 NTN1O95631 604 aa12.87□□□□□ -0.35
CTSA-219ENST00000607841 PSMA4P25789 261 aaKnown RBP12.87□□□□□ -0.35
CTSA-219ENST00000607841 FKBP2P26885 142 aaKnown RBP12.87□□□□□ -0.35
CTSA-219ENST00000607841 APOBEC1P41238 236 aaKnown RBP12.87□□□□□ -0.35
CTSA-219ENST00000607841 SMSP52788 366 aa12.87□□□□□ -0.35
CTSA-219ENST00000607841 DLX5P56178 289 aa12.87□□□□□ -0.35
CTSA-219ENST00000607841 CLDN18P56856 261 aa12.87□□□□□ -0.35
CTSA-219ENST00000607841 RPS3AP61247 264 aaKnown RBP12.87□□□□□ -0.35
CTSA-219ENST00000607841 PLAURQ03405 335 aa12.87□□□□□ -0.35
CTSA-219ENST00000607841 MERTKQ12866 999 aa12.87□□□□□ -0.35
CTSA-219ENST00000607841 SELENBP1Q13228 472 aa12.87□□□□□ -0.35
CTSA-219ENST00000607841 PDSS1Q5T2R2 415 aa12.87□□□□□ -0.35
CTSA-219ENST00000607841 C3P1Q6ZMU1 363 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms