RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 LRRC8CQ8TDW0 803 aa17.22■□□□□ 0.35
CTSA-217ENST00000607482 NINJ1Q92982 152 aa17.22■□□□□ 0.35
CTSA-217ENST00000607482 CPNE4Q96A23 557 aaPredicted RBP17.22■□□□□ 0.35
CTSA-217ENST00000607482 NPAS1Q99742 590 aa17.22■□□□□ 0.35
CTSA-217ENST00000607482 SERHL2Q9H4I8 314 aa17.22■□□□□ 0.35
CTSA-217ENST00000607482 RMND5AQ9H871 391 aa17.22■□□□□ 0.35
CTSA-217ENST00000607482 POLE3Q9NRF9 147 aa17.22■□□□□ 0.35
CTSA-217ENST00000607482 KLHL28Q9NXS3 571 aa17.22■□□□□ 0.35
CTSA-217ENST00000607482 ST6GALNAC2Q9UJ37 374 aa17.22■□□□□ 0.35
CTSA-217ENST00000607482 PCNX3Q9H6A9 2034 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 NPIPB9F8W1W9 429 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 UBDO15205 165 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 KRT75O95678 551 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 GSNP06396 782 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 PRKCAP17252 672 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 PGCP20142 388 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 IL11P20809 199 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 PSMA4P25789 261 aaKnown RBP17.21■□□□□ 0.35
CTSA-217ENST00000607482 UGT2B10P36537 528 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 IST1P53990 364 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 PHC1P78364 1004 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 SELENBP1Q13228 472 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 GNA13Q14344 377 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 RNPS1Q15287 305 aaKnown RBP17.21■□□□□ 0.35
CTSA-217ENST00000607482 TOMM34Q15785 309 aaPredicted RBP17.21■□□□□ 0.35
CTSA-217ENST00000607482 ZNF141Q15928 474 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 AGBL2Q5U5Z8 902 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 ZNF619Q8N2I2 560 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 ROBO4Q8WZ75 1007 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 ZNF75CPQ92670 426 aaPredicted RBP17.21■□□□□ 0.35
CTSA-217ENST00000607482 ZC3HAV1LQ96H79 300 aaKnown RBP17.21■□□□□ 0.35
CTSA-217ENST00000607482 MARK4Q96L34 752 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 TEX37Q96LM6 180 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 ZNF350Q9GZX5 532 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 LAT2Q9GZY6 243 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 C12orf49Q9H741 205 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 CACYBPQ9HB71 228 aaKnown RBP17.21■□□□□ 0.35
CTSA-217ENST00000607482 CCM2LQ9NUG4 571 aaPredicted RBP17.21■□□□□ 0.35
CTSA-217ENST00000607482 LIPT1Q9Y234 373 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 SLC35A3Q9Y2D2 325 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 PLEKHA6Q9Y2H5 1048 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 GPR45Q9Y5Y3 372 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 SPG11Q96JI7 2443 aa17.21■□□□□ 0.35
CTSA-217ENST00000607482 SCN2BO60939 215 aa17.2■□□□□ 0.34
CTSA-217ENST00000607482 UGT2B17O75795 530 aa17.2■□□□□ 0.34
CTSA-217ENST00000607482 NR2F1P10589 423 aa17.2■□□□□ 0.34
CTSA-217ENST00000607482 RYKP34925 604 aa17.2■□□□□ 0.34
CTSA-217ENST00000607482 STX1BP61266 288 aa17.2■□□□□ 0.34
CTSA-217ENST00000607482 TXNL4AP83876 142 aaKnown RBP17.2■□□□□ 0.34
CTSA-217ENST00000607482 MERTKQ12866 999 aa17.2■□□□□ 0.34
CTSA-217ENST00000607482 GSTA3Q16772 222 aa17.2■□□□□ 0.34
CTSA-217ENST00000607482 CTU2Q2VPK5 515 aaKnown RBP17.2■□□□□ 0.34
CTSA-217ENST00000607482 TIGD2Q4W5G0 525 aa17.2■□□□□ 0.34
CTSA-217ENST00000607482 HEPHL1Q6MZM0 1159 aa17.2■□□□□ 0.34
CTSA-217ENST00000607482 ZNF474Q6S9Z5 364 aaPredicted RBP17.2■□□□□ 0.34
CTSA-217ENST00000607482 OLIG3Q7RTU3 272 aa17.2■□□□□ 0.34
CTSA-217ENST00000607482 PNPT1Q8TCS8 783 aaKnown RBP17.2■□□□□ 0.34
CTSA-217ENST00000607482 ZFP90Q8TF47 636 aa17.2■□□□□ 0.34
CTSA-217ENST00000607482 INPP5KQ9BT40 448 aa17.2■□□□□ 0.34
CTSA-217ENST00000607482 LIME1Q9H400 295 aa17.2■□□□□ 0.34
CTSA-217ENST00000607482 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.2■□□□□ 0.34
CTSA-217ENST00000607482 ARGLU1Q9NWB6 273 aaPredicted RBP17.2■□□□□ 0.34
CTSA-217ENST00000607482 SPIN1Q9Y657 262 aaPredicted RBP17.2■□□□□ 0.34
CTSA-217ENST00000607482 MPDZO75970 2070 aa17.2■□□□□ 0.34
CTSA-217ENST00000607482 FAM221AA4D161 298 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 TMEM247A6NEH6 219 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 KIAA0513O60268 411 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 SS18L1O75177 396 aaPredicted RBP17.19■□□□□ 0.34
CTSA-217ENST00000607482 H6PDO95479 791 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 TFPIP10646 304 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 SKP2Q13309 424 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 SLC9B1Q4ZJI4 515 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 PDCD4Q53EL6 469 aaKnown RBP17.19■□□□□ 0.34
CTSA-217ENST00000607482 TYW3Q6IPR3 259 aaKnown RBP17.19■□□□□ 0.34
CTSA-217ENST00000607482 C3orf33Q6P1S2 294 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 DNAJC14Q6Y2X3 702 aaPredicted RBP17.19■□□□□ 0.34
CTSA-217ENST00000607482 BEND4Q6ZU67 534 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 MIER2Q8N344 545 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 ARFGAP2Q8N6H7 521 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 OIT3Q8WWZ8 545 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 ST8SIA1Q92185 356 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 ARSGQ96EG1 525 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 ADGRG7Q96K78 797 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 WFIKKN1Q96NZ8 548 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 OR5B2Q96R09 309 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 KLHDC3Q9BQ90 382 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 PLSCR4Q9NRQ2 329 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 TESMINQ9Y4I5 508 aa17.19■□□□□ 0.34
CTSA-217ENST00000607482 KLF11O14901 512 aa17.18■□□□□ 0.34
CTSA-217ENST00000607482 PRKD3O94806 890 aa17.18■□□□□ 0.34
CTSA-217ENST00000607482 CGAP01215 116 aa17.18■□□□□ 0.34
CTSA-217ENST00000607482 RAF1P04049 648 aa17.18■□□□□ 0.34
CTSA-217ENST00000607482 UQCRBP14927 111 aa17.18■□□□□ 0.34
CTSA-217ENST00000607482 PCYT1AP49585 367 aa17.18■□□□□ 0.34
CTSA-217ENST00000607482 ZNF239Q16600 458 aaKnown RBP17.18■□□□□ 0.34
CTSA-217ENST00000607482 C6orf10Q5SRN2 563 aa17.18■□□□□ 0.34
CTSA-217ENST00000607482 ANKRD34AQ69YU3 496 aa17.18■□□□□ 0.34
CTSA-217ENST00000607482 SPNS3Q6ZMD2 512 aa17.18■□□□□ 0.34
CTSA-217ENST00000607482 FCRLAQ7L513 359 aa17.18■□□□□ 0.34
CTSA-217ENST00000607482 HMGN2P46Q86SG4 172 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms