RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 NCMAPQ5T1S8 102 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 ADAM5Q6NVV9 412 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 SLC43A2Q8N370 569 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 NATD1Q8N6N6 113 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 TMCO5AQ8N6Q1 288 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 FNDC5Q8NAU1 212 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 OR5D16Q8NGK9 328 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 OR5W2Q8NH69 310 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 SFXN5Q8TD22 340 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 HSD17B8Q92506 261 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 NEUROG1Q92886 237 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 KISS1RQ969F8 398 aaPredicted RBP11.69□□□□□ -0.54
RPS28-204ENST00000602140 MOAP1Q96BY2 351 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 COQ8BQ96D53 544 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 MRGPRX4Q96LA9 322 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 PRPF18Q99633 342 aaKnown RBP11.69□□□□□ -0.54
RPS28-204ENST00000602140 ESRP2Q9H6T0 727 aaKnown RBP11.69□□□□□ -0.54
RPS28-204ENST00000602140 NGBQ9NPG2 151 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 TLN2Q9Y4G6 2542 aa11.69□□□□□ -0.54
RPS28-204ENST00000602140 HIVEP2P31629 2446 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 ZNF814B7Z6K7 855 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 ZNF264O43296 627 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 SKAP2O75563 359 aaPredicted RBP11.68□□□□□ -0.54
RPS28-204ENST00000602140 SOD3P08294 240 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 UBL4AP11441 157 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 PRPS1L1P21108 318 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 SOAT1P35610 550 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 RAC3P60763 192 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 RPS26P62854 115 aaKnown RBP11.68□□□□□ -0.54
RPS28-204ENST00000602140 HBA1P69905 142 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 SELENBP1Q13228 472 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 ITGADQ13349 1161 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 P2RY6Q15077 328 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 QPRTQ15274 297 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 SLC25A53Q5H9E4 307 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 PDZK1Q5T2W1 519 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 ATG4DQ86TL0 474 aaPredicted RBP11.68□□□□□ -0.54
RPS28-204ENST00000602140 RIMKLAQ8IXN7 391 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 TOR1AIP2Q8NFQ8 470 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 TCP10LQ8TDR4 215 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 FBXW5Q969U6 566 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 SDF2Q99470 211 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 MDFIQ99750 246 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 DUSP26Q9BV47 211 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 BHLHE41Q9C0J9 482 aaPredicted RBP11.68□□□□□ -0.54
RPS28-204ENST00000602140 KLHL9Q9P2J3 617 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 ZDHHC2Q9UIJ5 367 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 USF3Q68DE3 2245 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 PRR14LQ5THK1 2151 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 CSPG4Q6UVK1 2322 aa11.68□□□□□ -0.54
RPS28-204ENST00000602140 SERINC4A6NH21 518 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 ESPNB1AK53 854 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 C9JVG2 144 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 OVOL3O00110 214 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 EIF4E2O60573 245 aaKnown RBP11.67□□□□□ -0.54
RPS28-204ENST00000602140 CYP7B1O75881 506 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 MATN1P21941 496 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 RASGEF1BQ0VAM2 473 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 CBFBQ13951 182 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 VEZF1Q14119 521 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 GPR68Q15743 365 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 CLEC12BQ2HXU8 276 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 PGS1Q32NB8 556 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 ZNF672Q499Z4 452 aaPredicted RBP11.67□□□□□ -0.54
RPS28-204ENST00000602140 BHLHB9Q6PI77 547 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 Q6ZT83 130 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 BHLHA15Q7RTS1 189 aaPredicted RBP11.67□□□□□ -0.54
RPS28-204ENST00000602140 RIBC1Q8N443 379 aaPredicted RBP11.67□□□□□ -0.54
RPS28-204ENST00000602140 MAPK1IP1LQ8NDC0 245 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 KBTBD8Q8NFY9 601 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 PIWIL2Q8TC59 973 aaKnown RBP11.67□□□□□ -0.54
RPS28-204ENST00000602140 SMAP2Q8WU79 429 aaPredicted RBP11.67□□□□□ -0.54
RPS28-204ENST00000602140 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.67□□□□□ -0.54
RPS28-204ENST00000602140 GTPBP3Q969Y2 492 aaKnown RBP11.67□□□□□ -0.54
RPS28-204ENST00000602140 ZNF775Q96BV0 537 aaPredicted RBP11.67□□□□□ -0.54
RPS28-204ENST00000602140 TUBGCP3Q96CW5 907 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 TRMT61AQ96FX7 289 aaKnown RBP11.67□□□□□ -0.54
RPS28-204ENST00000602140 OR5B2Q96R09 309 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 USB1Q9BQ65 265 aaKnown RBP11.67□□□□□ -0.54
RPS28-204ENST00000602140 PSD2Q9BQI7 771 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 THUMPD3Q9BV44 507 aaKnown RBP11.67□□□□□ -0.54
RPS28-204ENST00000602140 POTEKPQ9BYX7 375 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 QRSL1Q9H0R6 528 aaKnown RBP11.67□□□□□ -0.54
RPS28-204ENST00000602140 BCO1Q9HAY6 547 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 PRSS50Q9UI38 385 aa11.67□□□□□ -0.54
RPS28-204ENST00000602140 ING1Q9UK53 422 aaPredicted RBP11.67□□□□□ -0.54
RPS28-204ENST00000602140 DPRXA6NFQ7 191 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 RNF223E7ERA6 249 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 SMAD9O15198 467 aaKnown RBP11.66□□□□□ -0.54
RPS28-204ENST00000602140 LYZL6O75951 148 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 H6PDO95479 791 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 DANCRP0C864 163 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 G6PDP11413 515 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 EDNRAP25101 427 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 SERPINB5P36952 375 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 CDKN1AP38936 164 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 OR3A2P47893 321 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 BSPH1Q075Z2 132 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 STK11Q15831 433 aa11.66□□□□□ -0.54
RPS28-204ENST00000602140 TIGD2Q4W5G0 525 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms