RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ZCCHC12Q6PEW1 402 aa14.77□□□□□ -0.05
USE1-208ENST00000600970 LRIG3Q6UXM1 1119 aa14.77□□□□□ -0.05
USE1-208ENST00000600970 OR52N5Q8NH56 324 aa14.77□□□□□ -0.05
USE1-208ENST00000600970 GPR119Q8TDV5 335 aa14.77□□□□□ -0.05
USE1-208ENST00000600970 IQCGQ9H095 443 aaKnown RBP14.77□□□□□ -0.05
USE1-208ENST00000600970 CHODLQ9H9P2 273 aa14.77□□□□□ -0.05
USE1-208ENST00000600970 KCNS2Q9ULS6 477 aa14.77□□□□□ -0.05
USE1-208ENST00000600970 PYCARDQ9ULZ3 195 aa14.77□□□□□ -0.05
USE1-208ENST00000600970 CCL27Q9Y4X3 112 aa14.77□□□□□ -0.05
USE1-208ENST00000600970 MALRD1Q5VYJ5 2156 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 NPIPA5A0A0B4J1W7 369 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 ZNF724A8MTY0 619 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 NPIPA7E9PJI5 369 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 RAD51DO75771 328 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 HSPA4LO95757 839 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 CSF3P09919 207 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 DHRS4L1P0CG22 281 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 NPIPA8P0DM63 369 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 PTAFRP25105 342 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 CD40P25942 277 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 GZMKP49863 264 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 ZNF83P51522 516 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 NDUFAF6Q330K2 333 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 KLHL26Q53HC5 615 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 FAM120AOSQ5T036 256 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 FAM166AQ6J272 317 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 TIFABQ6ZNK6 161 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 ZNF572Q7Z3I7 529 aaPredicted RBP14.76□□□□□ -0.05
USE1-208ENST00000600970 JADE3Q92613 823 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 ZNF764Q96H86 408 aaPredicted RBP14.76□□□□□ -0.05
USE1-208ENST00000600970 MRGPRX4Q96LA9 322 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 BTBD2Q9BX70 525 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 RRAGDQ9NQL2 400 aaPredicted RBP14.76□□□□□ -0.05
USE1-208ENST00000600970 GIN1Q9NXP7 522 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 SLC25A15Q9Y619 301 aa14.76□□□□□ -0.05
USE1-208ENST00000600970 NPIPB8E9PQR5 432 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 AKAP10O43572 662 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 TBX19O60806 448 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 SEC22BO75396 215 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 LY6HO94772 140 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 EFNA4P52798 201 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 SLC25A53Q5H9E4 307 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.75□□□□□ -0.05
USE1-208ENST00000600970 ZNF544Q6NX49 715 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 C8orf74Q6P047 294 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 KLHL17Q6TDP4 642 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 LCA5Q86VQ0 697 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 ZNF100Q8IYN0 542 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 CCNYL1Q8N7R7 359 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 ZNF527Q8NB42 609 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 CDS1Q92903 461 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 PPCDCQ96CD2 204 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 METTL2AQ96IZ6 378 aaKnown RBP14.75□□□□□ -0.05
USE1-208ENST00000600970 REEP4Q9H6H4 257 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 ANKZF1Q9H8Y5 726 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 TNFRSF12AQ9NP84 129 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 ACSS1Q9NUB1 689 aaPredicted RBP14.75□□□□□ -0.05
USE1-208ENST00000600970 SH3BP4Q9P0V3 963 aa14.75□□□□□ -0.05
USE1-208ENST00000600970 A0A1W2PR80 420 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 CIB4A0PJX0 185 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 IGHV3-9P01782 118 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 ATP6V1C1P21283 382 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 PRPH2P23942 346 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 GCAP28676 217 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 CHRNEQ04844 493 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 FBXW9Q5XUX1 488 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 GALNT5Q7Z7M9 940 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 DEPDC4Q8N2C3 294 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 MSI2Q96DH6 328 aaKnown RBP14.74□□□□□ -0.05
USE1-208ENST00000600970 CHMP6Q96FZ7 201 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 OR5B2Q96R09 309 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 STACQ99469 402 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 INPP5KQ9BT40 448 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 HOXD1Q9GZZ0 328 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 PIGUQ9H490 435 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 DUSP22Q9NRW4 184 aa14.74□□□□□ -0.05
USE1-208ENST00000600970 A0A087WUV0 522 aaPredicted RBP14.73□□□□□ -0.05
USE1-208ENST00000600970 LOC100289279A0A1B0GTE1 492 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 VWC2LB2RUY7 222 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 H3BNH8 94 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 M0R1B8 84 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 GTPBP1O00178 669 aaKnown RBP14.73□□□□□ -0.05
USE1-208ENST00000600970 CRCPO75575 148 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 H6PDO95479 791 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 HMGN2P05204 90 aaKnown RBP14.73□□□□□ -0.05
USE1-208ENST00000600970 EFNA1P20827 205 aaPredicted RBP14.73□□□□□ -0.05
USE1-208ENST00000600970 CASQ1P31415 396 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 PDE7AQ13946 482 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 GGTLC2Q14390 218 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 LASP1Q14847 261 aaKnown RBP14.73□□□□□ -0.05
USE1-208ENST00000600970 LIPNQ5VXI9 398 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 C3orf33Q6P1S2 294 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 UBE2J2Q8N2K1 259 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 RFWD2Q8NHY2 731 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 FAM120BQ96EK7 910 aaKnown RBP14.73□□□□□ -0.05
USE1-208ENST00000600970 FCRL1Q96LA6 429 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 TSSK3Q96PN8 268 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 PRR14Q9BWN1 585 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 SIRT3Q9NTG7 399 aaPredicted RBP14.73□□□□□ -0.05
USE1-208ENST00000600970 ZCCHC3Q9NUD5 404 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms