RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 SLC26A7Q8TE54 656 aa10.6□□□□□ -0.71
CHMP2A-207ENST00000600804 DUSP19Q8WTR2 217 aa10.6□□□□□ -0.71
CHMP2A-207ENST00000600804 CCDC124Q96CT7 223 aaKnown RBP10.6□□□□□ -0.71
CHMP2A-207ENST00000600804 ZNF597Q96LX8 424 aa10.6□□□□□ -0.71
CHMP2A-207ENST00000600804 UBQLN3Q9H347 655 aa10.6□□□□□ -0.71
CHMP2A-207ENST00000600804 GALNT9Q9HCQ5 603 aa10.6□□□□□ -0.71
CHMP2A-207ENST00000600804 ZFP64Q9NPA5 681 aa10.6□□□□□ -0.71
CHMP2A-207ENST00000600804 DEPPQ9NTK1 212 aa10.6□□□□□ -0.71
CHMP2A-207ENST00000600804 QPCTLQ9NXS2 382 aa10.6□□□□□ -0.71
CHMP2A-207ENST00000600804 KLHL28Q9NXS3 571 aa10.6□□□□□ -0.71
CHMP2A-207ENST00000600804 DNAJB12Q9NXW2 375 aaKnown RBP10.6□□□□□ -0.71
CHMP2A-207ENST00000600804 ICAM5Q9UMF0 924 aa10.6□□□□□ -0.71
CHMP2A-207ENST00000600804 NCOA6Q14686 2063 aaPredicted RBP10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 TCRBV5S2A0A599 114 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 TCRBV3S1A0A5B6 114 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 ANKUB1A6NFN9 424 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 LRRC3CA6NJW4 275 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 GTPBP1O00178 669 aaKnown RBP10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 FMO6PO60774 539 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 CBR3O75828 277 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 UMPSP11172 480 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 NQO1P15559 274 aaKnown RBP10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 ATP6V1B2P21281 511 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 P2RX1P51575 399 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 KCNJ2P63252 427 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 FLOT2Q14254 428 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 GLYR1Q49A26 553 aaPredicted RBP10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 PRAMEF20Q5VT98 475 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 ZNF550Q7Z398 422 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 CLIP4Q8N3C7 705 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 ZNF614Q8N883 585 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 SMYD1Q8NB12 490 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 OR2M3Q8NG83 312 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 OR1J4Q8NGS1 313 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 OR5W2Q8NH69 310 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 B4GALNT2Q8NHY0 566 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 GEMIN6Q8WXD5 167 aaKnown RBP10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 PROX1Q92786 737 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 ARHGDIGQ99819 225 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 HES7Q9BYE0 225 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 POLR2J2Q9GZM3 115 aaKnown RBP10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 POLR2J3Q9H1A7 115 aaKnown RBP10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 MAGIXQ9H6Y5 334 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 PPP4R1LQ9P1A2 415 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 SLC13A4Q9UKG4 626 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 SLC9A8Q9Y2E8 581 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 MED12Q93074 2177 aa10.59□□□□□ -0.71
CHMP2A-207ENST00000600804 GTF3C1Q12789 2109 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 MTORP42345 2549 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 MPDZO75970 2070 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 A0A087WZY1 265 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 A0A0G2JMM0 328 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 A0A1W2PPB8 328 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 A0A1W2PRS3 328 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 C7orf72A4D263 438 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 CLDN24A6NM45 220 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 KIR3DP1A8MWS1 328 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 B4DXG7 233 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 HCRTR2O43614 444 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 SCO2O43819 266 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 TPST1O60507 370 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 BCAS1O75363 584 aaPredicted RBP10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 CIB2O75838 187 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 OPN1SWP03999 348 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 SEMG1P04279 462 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 GPIP06744 558 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 UBTFL6P0CB48 400 aaPredicted RBP10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 ACAA2P42765 397 aaKnown RBP10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 MASP1P48740 699 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 DNASE1L1P49184 302 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 MEOX1P50221 254 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 ST13P50502 369 aaKnown RBP10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 ACTR3P61158 418 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 ZNF117Q03924 483 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 CBFBQ13951 182 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 SLC25A53Q5H9E4 307 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 CBLN3Q6UW01 205 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 SPPL2CQ8IUH8 684 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 LSMEM1Q8N8F7 131 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 CNOT9Q92600 299 aaKnown RBP10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 C1GALT1C1Q96EU7 318 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 DUS3LQ96G46 650 aaKnown RBP10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 PYURFQ96I23 114 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 LRGUKQ96M69 825 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 ZNF703Q9H7S9 590 aaPredicted RBP10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 PTGES2Q9H7Z7 377 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 KLHL1Q9NR64 748 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 RLIMQ9NVW2 624 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 TUBA8Q9NY65 449 aaPredicted RBP10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 B4GALT7Q9UBV7 327 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 CARD8Q9Y2G2 431 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 C15orf41Q9Y2V0 281 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 NCKAP5O14513 1909 aa10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 ZNF469Q96JG9 3925 aaPredicted RBP10.58□□□□□ -0.72
CHMP2A-207ENST00000600804 PINLYPA6NC86 204 aa10.57□□□□□ -0.72
CHMP2A-207ENST00000600804 UQCRBP14927 111 aa10.57□□□□□ -0.72
CHMP2A-207ENST00000600804 PGCP20142 388 aa10.57□□□□□ -0.72
CHMP2A-207ENST00000600804 ADH6P28332 368 aa10.57□□□□□ -0.72
CHMP2A-207ENST00000600804 SRD5A2P31213 254 aa10.57□□□□□ -0.72
CHMP2A-207ENST00000600804 MAGEA2P43356 314 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms