RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 STK11Q15831 433 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 XKR7Q5GH72 579 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 PDZK1Q5T2W1 519 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 TFAP2EQ6VUC0 442 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 MAPK1IP1LQ8NDC0 245 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 TOR1AIP2Q8NFQ8 470 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 ZFP90Q8TF47 636 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 ZNF524Q96C55 264 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 DNAJA3Q96EY1 480 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 OR5B2Q96R09 309 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 RNF115Q9Y4L5 304 aa15.64■□□□□ 0.09
SHKBP1-223ENST00000600552 ZNF264O43296 627 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 GCM2O75603 506 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 UBL4AP11441 157 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 PRPS1L1P21108 318 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 MATN1P21941 496 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 RPS4XP62701 263 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 HBA1P69905 142 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 FAPQ12884 760 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 TAB1Q15750 504 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 SFRP5Q5T4F7 317 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 OR4F3Q6IEY1 312 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 C6orf120Q7Z4R8 191 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 ATG4DQ86TL0 474 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 CLECL1Q8IZS7 167 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 ZNF611Q8N823 705 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 OR5W2Q8NH69 310 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 SFXN5Q8TD22 340 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 KISS1RQ969F8 398 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 GTPBP3Q969Y2 492 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 ZBTB9Q96C00 473 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 COQ8BQ96D53 544 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 THUMPD3Q9BV44 507 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 HDHD5Q9BXW7 423 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 COQ10BQ9H8M1 238 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 MKS1Q9NXB0 559 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 PRSS50Q9UI38 385 aa15.63■□□□□ 0.09
SHKBP1-223ENST00000600552 LYZL6O75951 148 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 CPSF4O95639 269 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 TFPIP10646 304 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 ADH6P28332 368 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 SUMO3P55854 103 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 RASGEF1BQ0VAM2 473 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 TNK1Q13470 666 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 CBFBQ13951 182 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 VEZF1Q14119 521 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 PDCD2Q16342 344 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 TIGD2Q4W5G0 525 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 BHLHA15Q7RTS1 189 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 C16orf62Q7Z3J2 963 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 PRIMA1Q86XR5 153 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 NUDCD3Q8IVD9 361 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 HOMEZQ8IX15 550 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 GABRG1Q8N1C3 465 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 NATD1Q8N6N6 113 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 OR4A15Q8NGL6 344 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 ARL8AQ96BM9 186 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 MOAP1Q96BY2 351 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 PKNOX2Q96KN3 472 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 SLC35G5Q96KT7 338 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 MRGPRX4Q96LA9 322 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 SDF2Q99470 211 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 BHLHE41Q9C0J9 482 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 ESRP2Q9H6T0 727 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 NGBQ9NPG2 151 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 MKLN1Q9UL63 735 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 ACTL7BQ9Y614 415 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 HIVEP2P31629 2446 aa15.62■□□□□ 0.09
SHKBP1-223ENST00000600552 RNF103-CHMP3A0A140T963 221 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 SERINC4A6NH21 518 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 KIAA1324LA8MWY0 1029 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 EIF4E2O60573 245 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 FCMRO60667 390 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 BPGMP07738 259 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 UBTFL6P0CB48 400 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 CDKN1AP38936 164 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 MERTKQ12866 999 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 SELENBP1Q13228 472 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 BHLHB9Q6PI77 547 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 HMGN2P46Q86SG4 172 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 ANKRD46Q86W74 232 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 ZNF100Q8IYN0 542 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 RIBC1Q8N443 379 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 PSMA8Q8TAA3 256 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 HSD17B8Q92506 261 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 FBXW5Q969U6 566 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 ZNF300Q96RE9 604 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 TMEM204Q9BSN7 226 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 OR10A4Q9H209 315 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 SERHL2Q9H4I8 314 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 ZNF701Q9NV72 531 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 KLHL9Q9P2J3 617 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 PCDHGB4Q9UN71 923 aa15.61■□□□□ 0.09
SHKBP1-223ENST00000600552 CENPVL1A0A0U1RR11 272 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 ZNF814B7Z6K7 855 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 RNF223E7ERA6 249 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 NPIPB9F8W1W9 429 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 H6PDO95479 791 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 CSTAP01040 98 aa15.6■□□□□ 0.09
SHKBP1-223ENST00000600552 CCNA2P20248 432 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms