RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 OR7A2PQ8NGA2 310 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 OR5AK3PQ8NH89 298 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 ACTRT2Q8TDY3 377 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 ZFP90Q8TF47 636 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 MZB1Q8WU39 189 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 HSD17B8Q92506 261 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 ZNF75CPQ92670 426 aaPredicted RBP7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 CPNE4Q96A23 557 aaPredicted RBP7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 FAM120BQ96EK7 910 aaKnown RBP7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 MS4A4EQ96PG1 132 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 OR5B2Q96R09 309 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 KCNK17Q96T54 332 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 RHNO1Q9BSD3 238 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 POTEKPQ9BYX7 375 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 OR10A4Q9H209 315 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 TUBB1Q9H4B7 451 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 REEP4Q9H6H4 257 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 CHODLQ9H9P2 273 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 LRTM1Q9HBL6 345 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 FANCFQ9NPI8 374 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 RRAGDQ9NQL2 400 aaPredicted RBP7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 ZCCHC3Q9NUD5 404 aaKnown RBP7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 PAQR5Q9NXK6 330 aaPredicted RBP7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 ICAM5Q9UMF0 924 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 NFU1Q9UMS0 254 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 SNX8Q9Y5X2 465 aa7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 HEATR1Q9H583 2144 aaKnown RBP7.63□□□□□ -1.19
SHKBP1-220ENST00000599716 SERTM1A2A2V5 107 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 SLC35F4A4IF30 521 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 CCDC151A5D8V7 595 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 TMCC2O75069 709 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 BCAS1O75363 584 aaPredicted RBP7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 PROCP04070 461 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 NGFRP08138 427 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 FAM157CP0CG43 387 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 NTF4P34130 210 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 GSTM5P46439 218 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 OR3A2P47893 321 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 CASP9P55211 416 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 CKAP4Q07065 602 aaKnown RBP7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 RASGEF1BQ0VAM2 473 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 TP53BP2Q13625 1128 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 RNPS1Q15287 305 aaKnown RBP7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 ETFDHQ16134 617 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 EXOSC6Q5RKV6 272 aaKnown RBP7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 LIPMQ5VYY2 423 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 GTF2IRD2BQ6EKJ0 949 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 C11orf71Q6IPW1 123 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 SLC22A25Q6T423 547 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 Q6ZT83 130 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 IKBIPQ70UQ0 350 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 GTF2IRD2Q86UP8 949 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 DTX2Q86UW9 622 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 OR5D16Q8NGK9 328 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 OR6Y1Q8NGX8 325 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 CEP70Q8NHQ1 597 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 AGR3Q8TD06 166 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 GPR119Q8TDV5 335 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 C16orf45Q96MC5 204 aaPredicted RBP7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 TNFRSF13CQ96RJ3 184 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 BTBD2Q9BX70 525 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 HDHD5Q9BXW7 423 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 NGBQ9NPG2 151 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 C1orf109Q9NX04 203 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 TRAF6Q9Y4K3 522 aa7.62□□□□□ -1.19
SHKBP1-220ENST00000599716 A0A1W2PQD3 144 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 OR5H1A6NKK0 313 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 SMIM23A6NLE4 172 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 ESPNB1AK53 854 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 M0R1B8 84 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 GTPBP1O00178 669 aaKnown RBP7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 RIPK2O43353 540 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 FESP07332 822 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 CHRNGP07510 517 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 PABPC4LP0CB38 370 aaKnown RBP7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 IGHV4-31P0DP07 118 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 LAMP1P11279 417 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 BCKDHAP12694 445 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 GGT1P19440 569 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 ATP6V1C1P21283 382 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 IGFBP5P24593 272 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 ELK4P28324 431 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 SLC7A1P30825 629 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 TTKP33981 857 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 FRKP42685 505 aaPredicted RBP7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 P2RX1P51575 399 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 SLC25A3Q00325 362 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 PDE7AQ13946 482 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 QPRTQ15274 297 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 TIGD2Q4W5G0 525 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 KLHL26Q53HC5 615 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 CFAP157Q5JU67 520 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 DCST2Q5T1A1 773 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 PDZK1Q5T2W1 519 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 CLEC2AQ6UVW9 174 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 TDRPQ86YL5 185 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 UBE2J2Q8N2K1 259 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 ZNF433Q8N7K0 673 aaPredicted RBP7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 CCDC63Q8NA47 563 aa7.61□□□□□ -1.19
SHKBP1-220ENST00000599716 OR10H5Q8NGA6 315 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms