RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 GTPBP1O00178 669 aaKnown RBP12.33□□□□□ -0.44
SCAF1-203ENST00000598359 SDHDO14521 159 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 ANKRD28O15084 1053 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 EFNA2O43921 213 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 MGRN1O60291 552 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 FCMRO60667 390 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 SCN2BO60939 215 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 CGAP01215 116 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 KRT16P08779 473 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 ALDOCP09972 364 aaKnown RBP12.33□□□□□ -0.44
SCAF1-203ENST00000598359 CALB2P22676 271 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 CCKARP32238 428 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 IDH3AP50213 366 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 ATP12AP54707 1039 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 ELF3P78545 371 aaPredicted RBP12.33□□□□□ -0.44
SCAF1-203ENST00000598359 GUSBP1Q15486 140 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 EXOC3L2Q2M3D2 409 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 SPANXN4Q5MJ08 99 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 PDZK1Q5T2W1 519 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 EPGNQ6UW88 154 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 HMGN2P46Q86SG4 172 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 TMCO5AQ8N6Q1 288 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 ZNF527Q8NB42 609 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 ATP6V1C2Q8NEY4 427 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 OR2V1Q8NHB1 315 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 RAB8BQ92930 207 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 NSL1Q96IY1 281 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 TEX37Q96LM6 180 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 DACH2Q96NX9 599 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 WFIKKN1Q96NZ8 548 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 SDF2Q99470 211 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 EBF4Q9BQW3 602 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 CCDC106Q9BWC9 280 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 WDR55Q9H6Y2 383 aaPredicted RBP12.33□□□□□ -0.44
SCAF1-203ENST00000598359 MEAF6Q9HAF1 191 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 ARL8BQ9NVJ2 186 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 KLHL28Q9NXS3 571 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 KCNE5Q9UJ90 142 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 MKLN1Q9UL63 735 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 NUP214P35658 2090 aaPredicted RBP12.33□□□□□ -0.44
SCAF1-203ENST00000598359 C7orf72A4D263 438 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 RNASET2O00584 256 aaKnown RBP12.32□□□□□ -0.44
SCAF1-203ENST00000598359 HRGP04196 525 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 OR12D1P0DN82 309 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 KITP10721 976 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 POU2F1P14859 743 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 LBPP18428 481 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 CD79BP40259 229 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 KCNJ5P48544 419 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 UFM1P61960 85 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 RAC1P63000 192 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 EEF1A1P68104 462 aaKnown RBP12.32□□□□□ -0.44
SCAF1-203ENST00000598359 GPR68Q15743 365 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 EEF1A1P5Q5VTE0 462 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 METTL21CQ5VZV1 264 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 ANKRD34AQ69YU3 496 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 HBMQ6B0K9 141 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 TNFAIP8L2Q6P589 184 aaPredicted RBP12.32□□□□□ -0.44
SCAF1-203ENST00000598359 FAM214BQ7L5A3 538 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 ZNF550Q7Z398 422 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 LILRA2Q8N149 483 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 OR8J2Q8NGG1 315 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 FBXO27Q8NI29 283 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 ROBO4Q8WZ75 1007 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 OSTF1Q92882 214 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 RAB3IPQ96QF0 476 aaPredicted RBP12.32□□□□□ -0.44
SCAF1-203ENST00000598359 HOXD1Q9GZZ0 328 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 OR51I1Q9H343 314 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 C6orf203Q9P0P8 240 aaPredicted RBP12.32□□□□□ -0.44
SCAF1-203ENST00000598359 ICAM5Q9UMF0 924 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 PROCRQ9UNN8 238 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 TESMINQ9Y4I5 508 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 DTNAQ9Y4J8 743 aa12.32□□□□□ -0.44
SCAF1-203ENST00000598359 PRSS51A0A1B0GVH4 220 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 H3BNH8 94 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 ADAMDEC1O15204 470 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 HDAC3O15379 428 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 SIAH2O43255 324 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 CYP7B1O75881 506 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 SYNGR4O95473 234 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 PLGP00747 810 aaPredicted RBP12.31□□□□□ -0.44
SCAF1-203ENST00000598359 ME2P23368 584 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 DNASE1P24855 282 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 EPHA3P29320 983 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 IL12AP29459 219 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 P2RX1P51575 399 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 CCR4P51679 360 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 FAM174BQ3ZCQ3 159 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 BHLHB9Q6PI77 547 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 PAMR1Q6UXH9 720 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 C22orf34Q6ZV56 151 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 CHDHQ8NE62 594 aaPredicted RBP12.31□□□□□ -0.44
SCAF1-203ENST00000598359 GPR119Q8TDV5 335 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 UTP4Q969X6 686 aaKnown RBP12.31□□□□□ -0.44
SCAF1-203ENST00000598359 ZC3HAV1LQ96H79 300 aaKnown RBP12.31□□□□□ -0.44
SCAF1-203ENST00000598359 MARK4Q96L34 752 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 KLHL15Q96M94 604 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 CCDC28BQ9BUN5 200 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 SRXN1Q9BYN0 137 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 KLHL4Q9C0H6 718 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms