RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 PSMA4P25789 261 aaKnown RBP13.63□□□□□ -0.23
TRIM28-207ENST00000597136 ADH7P40394 386 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 EIPR1Q53HC9 387 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 MRPL2Q5T653 305 aaKnown RBP13.63□□□□□ -0.23
TRIM28-207ENST00000597136 RNF220Q5VTB9 566 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 GFRALQ6UXV0 394 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 FGD2Q7Z6J4 655 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 SLC22A16Q86VW1 577 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 CMIPQ8IY22 773 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 C10orf67Q8IYJ2 551 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 ST6GALNAC3Q8NDV1 305 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 OR1J4Q8NGS1 313 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 PROX1Q92786 737 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 SLCO4A1Q96BD0 722 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 DUS3LQ96G46 650 aaKnown RBP13.63□□□□□ -0.23
TRIM28-207ENST00000597136 SEPHS2Q99611 448 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 KLHDC3Q9BQ90 382 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 UGT2B28Q9BY64 529 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 TBL1XR1Q9BZK7 514 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 UBQLN3Q9H347 655 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 ZDHHC11Q9H8X9 412 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 CCM2LQ9NUG4 571 aaPredicted RBP13.63□□□□□ -0.23
TRIM28-207ENST00000597136 FBXL2Q9UKC9 423 aa13.63□□□□□ -0.23
TRIM28-207ENST00000597136 A0A1B0GTH9 108 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 ANKUB1A6NFN9 424 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 J3QKU1 62 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 SNPHO15079 494 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 BCAS1O75363 584 aaPredicted RBP13.62□□□□□ -0.23
TRIM28-207ENST00000597136 ANGPTL1O95841 491 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 SEMG1P04279 462 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 TNFRSF1BP20333 461 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 SLC7A1P30825 629 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 PLAURQ03405 335 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 SLC10A1Q14973 349 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 CD226Q15762 336 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 FAM98BQ52LJ0 330 aaKnown RBP13.62□□□□□ -0.23
TRIM28-207ENST00000597136 IFI44LQ53G44 452 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 PYDC1Q8WXC3 89 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 GEMIN6Q8WXD5 167 aaKnown RBP13.62□□□□□ -0.23
TRIM28-207ENST00000597136 SLC47A1Q96FL8 570 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 WFDC6Q9BQY6 131 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 ARMC7Q9H6L4 198 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 MAGIXQ9H6Y5 334 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 ZNF703Q9H7S9 590 aaPredicted RBP13.62□□□□□ -0.23
TRIM28-207ENST00000597136 MED11Q9P086 117 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 BAHCC1Q9P281 2608 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 TNFRSF10DQ9UBN6 386 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 SH3GLB1Q9Y371 365 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 ICE1Q9Y2F5 2266 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 H3BNH8 94 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 OIP5O43482 229 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 GMFGO60234 142 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 TRAPPC6AO75865 159 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 GDF1P27539 372 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 OR1E2P47887 323 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 CLK3P49761 638 aaKnown RBP13.62□□□□□ -0.23
TRIM28-207ENST00000597136 CHRNB3Q05901 458 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 NRF1Q16656 503 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 ZSWIM7Q19AV6 140 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 KRTCAP3Q53RY4 240 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 PLCZ1Q86YW0 608 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 GRAMD2AQ8IUY3 354 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 FAM109AQ8N4B1 249 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 PAPD5Q8NDF8 572 aaKnown RBP13.62□□□□□ -0.23
TRIM28-207ENST00000597136 PHOSPHO1Q8TCT1 267 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 CNOT9Q92600 299 aaKnown RBP13.62□□□□□ -0.23
TRIM28-207ENST00000597136 C7orf34Q96L11 122 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 ARHGDIGQ99819 225 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 SLC6A15Q9H2J7 730 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 DSN1Q9H410 356 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 KLHL28Q9NXS3 571 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 SLC13A4Q9UKG4 626 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 AURKCQ9UQB9 309 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 SLC35A3Q9Y2D2 325 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 C15orf41Q9Y2V0 281 aa13.62□□□□□ -0.23
TRIM28-207ENST00000597136 SPTAN1Q13813 2472 aaKnown RBP13.61□□□□□ -0.23
TRIM28-207ENST00000597136 ACOT7O00154 380 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 NDUFB5O43674 189 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 CSTAP01040 98 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 RAP2AP10114 183 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 HOXB6P17509 224 aaKnown RBP13.61□□□□□ -0.23
TRIM28-207ENST00000597136 ENDOUP21128 410 aaKnown RBP13.61□□□□□ -0.23
TRIM28-207ENST00000597136 KCNC4Q03721 635 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 TOMM20Q15388 145 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 ZFP1Q6P2D0 407 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 YRDCQ86U90 279 aaKnown RBP13.61□□□□□ -0.23
TRIM28-207ENST00000597136 ATCAYQ86WG3 371 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 CARM1Q86X55 608 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 LACC1Q8IV20 430 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 FAM71CQ8NEG0 241 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 OR4D11Q8NGI4 311 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 PRR7Q8TB68 274 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 STMN2Q93045 179 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 CHID1Q9BWS9 393 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 IL1RAPQ9NPH3 570 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 PLSCR2Q9NRY7 297 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 DNAJB12Q9NXW2 375 aaKnown RBP13.61□□□□□ -0.23
TRIM28-207ENST00000597136 PPP4R1LQ9P1A2 415 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 SLC9A8Q9Y2E8 581 aa13.61□□□□□ -0.23
TRIM28-207ENST00000597136 AP4S1Q9Y587 144 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms