RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 OPN3Q9H1Y3 402 aaPredicted RBP9.42□□□□□ -0.9
CCDC9-203ENST00000596938 GP6Q9HCN6 339 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 SDR39U1Q9NRG7 319 aaPredicted RBP9.42□□□□□ -0.9
CCDC9-203ENST00000596938 ST6GALNAC2Q9UJ37 374 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 PROCRQ9UNN8 238 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 SLC35A3Q9Y2D2 325 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 EMC9Q9Y3B6 208 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 WDR45Q9Y484 360 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 SPG11Q96JI7 2443 aa9.42□□□□□ -0.9
CCDC9-203ENST00000596938 ARHGAP21Q5T5U3 1957 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 KIAA1549Q9HCM3 1950 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 PRAMEF27A3QJZ7 478 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 HMGN4O00479 90 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 TGDSO95455 350 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 PLGP00747 810 aaPredicted RBP9.41□□□□□ -0.9
CCDC9-203ENST00000596938 HRGP04196 525 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 POU2F1P14859 743 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 CD1EP15812 388 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 CPOXP36551 454 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 PGM1P36871 562 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 KHKP50053 298 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 RNF144AP50876 292 aaPredicted RBP9.41□□□□□ -0.9
CCDC9-203ENST00000596938 ANXA11P50995 505 aaKnown RBP9.41□□□□□ -0.9
CCDC9-203ENST00000596938 IST1P53990 364 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 CTBP2P56545 445 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 KCNJ10P78508 379 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 QPRTQ15274 297 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 RNPS1Q15287 305 aaKnown RBP9.41□□□□□ -0.9
CCDC9-203ENST00000596938 MAPK14Q16539 360 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 NDUFAF6Q330K2 333 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 TMEM176BQ3YBM2 270 aaPredicted RBP9.41□□□□□ -0.9
CCDC9-203ENST00000596938 SLC9B1Q4ZJI4 515 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 TNFAIP8L2Q6P589 184 aaPredicted RBP9.41□□□□□ -0.9
CCDC9-203ENST00000596938 EPGNQ6UW88 154 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 FRRS1Q6ZNA5 592 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 MSANTD1Q6ZTZ1 278 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 ZNF619Q8N2I2 560 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 FAM71CQ8NEG0 241 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 RFWD2Q8NHY2 731 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 TMEM234Q8WY98 164 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 ST8SIA1Q92185 356 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 NRGNQ92686 78 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 CPNE4Q96A23 557 aaPredicted RBP9.41□□□□□ -0.9
CCDC9-203ENST00000596938 ZG16BQ96DA0 208 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 REXO5Q96IC2 774 aaKnown RBP9.41□□□□□ -0.9
CCDC9-203ENST00000596938 ATP6V1G3Q96LB4 118 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 C7orf26Q96N11 449 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 WFIKKN1Q96NZ8 548 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 OR52B2Q96RD2 323 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 INPP5KQ9BT40 448 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 THUMPD3Q9BV44 507 aaKnown RBP9.41□□□□□ -0.9
CCDC9-203ENST00000596938 CXXC4Q9H2H0 198 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 LIME1Q9H400 295 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 TMEM185BQ9H7F4 350 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 PLEKHF2Q9H8W4 249 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 MTHFD2LQ9H903 347 aaPredicted RBP9.41□□□□□ -0.9
CCDC9-203ENST00000596938 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.41□□□□□ -0.9
CCDC9-203ENST00000596938 ZIM2Q9NZV7 527 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 PRDM4Q9UKN5 801 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 TESMINQ9Y4I5 508 aa9.41□□□□□ -0.9
CCDC9-203ENST00000596938 HIVEP1P15822 2718 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 CENPVL1A0A0U1RR11 272 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 C9JVG2 144 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 RFXANKO14593 260 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 UBDO15205 165 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 KRT75O95678 551 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 C1QCP02747 245 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 ZCCHC18P0CG32 403 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 PGCP20142 388 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 FKBP2P26885 142 aaKnown RBP9.4□□□□□ -0.9
CCDC9-203ENST00000596938 SHC1P29353 583 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 SFTPDP35247 375 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 CDKN2CP42773 168 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 KCNJ5P48544 419 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 MRPL19P49406 292 aaKnown RBP9.4□□□□□ -0.9
CCDC9-203ENST00000596938 SESN3P58005 492 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 RAC3P60763 192 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 CHRNEQ04844 493 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 FUT5Q11128 374 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 SELENBP1Q13228 472 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 ZNF239Q16600 458 aaKnown RBP9.4□□□□□ -0.9
CCDC9-203ENST00000596938 TIGD2Q4W5G0 525 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 GPAT3Q53EU6 434 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 FBXW10Q5XX13 1052 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 LRRC74BQ6ZQY2 392 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 OLIG3Q7RTU3 272 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 RNF130Q86XS8 419 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 CMIPQ8IY22 773 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 SLC43A2Q8N370 569 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 TMCO5AQ8N6Q1 288 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 RNF128Q8TEB7 428 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 ZFP90Q8TF47 636 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 MBD6Q96DN6 1003 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 FOXC2Q99958 501 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 FANCFQ9NPI8 374 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 EXOSC3Q9NQT5 275 aaKnown RBP9.4□□□□□ -0.9
CCDC9-203ENST00000596938 SERINC1Q9NRX5 453 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 ACER3Q9NUN7 267 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 ZNF226Q9NYT6 803 aa9.4□□□□□ -0.9
CCDC9-203ENST00000596938 CLEC4AQ9UMR7 237 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms