RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 ELOVL5Q9NYP7 299 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 KCNE5Q9UJ90 142 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 PROCRQ9UNN8 238 aa13.69□□□□□ -0.22
TRIM28-203ENST00000593582 SPG11Q96JI7 2443 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 UBDO15205 165 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 DIAPH2O60879 1101 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 CGAP01215 116 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 PABPC4LP0CB38 370 aaKnown RBP13.68□□□□□ -0.22
TRIM28-203ENST00000593582 CD79BP40259 229 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 CTBP2P56545 445 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 FAM27E3Q08E93 113 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 SKP2Q13309 424 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 QPRTQ15274 297 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 GPAT3Q53EU6 434 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 TYW3Q6IPR3 259 aaKnown RBP13.68□□□□□ -0.22
TRIM28-203ENST00000593582 ZNF474Q6S9Z5 364 aaPredicted RBP13.68□□□□□ -0.22
TRIM28-203ENST00000593582 OLIG3Q7RTU3 272 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 MAVSQ7Z434 540 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 CDC20BQ86Y33 519 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 ZNF619Q8N2I2 560 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 GOLGA6L1Q8N7Z2 621 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 MARK4Q96L34 752 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 ATP6V1G3Q96LB4 118 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 INPP5KQ9BT40 448 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 THUMPD3Q9BV44 507 aaKnown RBP13.68□□□□□ -0.22
TRIM28-203ENST00000593582 ZIM2Q9NZV7 527 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 CLEC4AQ9UMR7 237 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 LIPT1Q9Y234 373 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 SLC35A3Q9Y2D2 325 aa13.68□□□□□ -0.22
TRIM28-203ENST00000593582 CENPVL1A0A0U1RR11 272 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 HMGN4O00479 90 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 RFXANKO14593 260 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 SS18L1O75177 396 aaPredicted RBP13.67□□□□□ -0.22
TRIM28-203ENST00000593582 H6PDO95479 791 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 NTN1O95631 604 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 GSNP06396 782 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 UBTFL6P0CB48 400 aaPredicted RBP13.67□□□□□ -0.22
TRIM28-203ENST00000593582 POU2F1P14859 743 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 SHC1P29353 583 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 SLC7A1P30825 629 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 UGT2B10P36537 528 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 CDKN2CP42773 168 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 FUT5Q11128 374 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 SELENBP1Q13228 472 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 MAPK14Q16539 360 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 TMEM176BQ3YBM2 270 aaPredicted RBP13.67□□□□□ -0.22
TRIM28-203ENST00000593582 SLC25A53Q5H9E4 307 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 AP1ARQ63HQ0 302 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 FRRS1Q6ZNA5 592 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 ZNF610Q8N9Z0 462 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 ATP6V1C2Q8NEY4 427 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 OR6K3Q8NGY3 331 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 LRRC8CQ8TDW0 803 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 TMEM234Q8WY98 164 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 ST8SIA1Q92185 356 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 NINJ1Q92982 152 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 CPNE4Q96A23 557 aaPredicted RBP13.67□□□□□ -0.22
TRIM28-203ENST00000593582 C7orf26Q96N11 449 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 TRNT1Q96Q11 434 aaKnown RBP13.67□□□□□ -0.22
TRIM28-203ENST00000593582 OR52B2Q96RD2 323 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 SAP130Q9H0E3 1048 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 SDR39U1Q9NRG7 319 aaPredicted RBP13.67□□□□□ -0.22
TRIM28-203ENST00000593582 USH1CQ9Y6N9 552 aa13.67□□□□□ -0.22
TRIM28-203ENST00000593582 C16orf97H3BN30 126 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 ETV2O00321 342 aaPredicted RBP13.66□□□□□ -0.22
TRIM28-203ENST00000593582 EFNA2O43921 213 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 DNAJA2O60884 412 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 KRT75O95678 551 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 PGCP20142 388 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 TESK1Q15569 626 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 ZNF239Q16600 458 aaKnown RBP13.66□□□□□ -0.22
TRIM28-203ENST00000593582 TIGD2Q4W5G0 525 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 MIER2Q8N344 545 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 PNPT1Q8TCS8 783 aaKnown RBP13.66□□□□□ -0.22
TRIM28-203ENST00000593582 ZFP90Q8TF47 636 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 DYDC1Q8WWB3 177 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 ZG16BQ96DA0 208 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 MED18Q9BUE0 208 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 RMND5AQ9H871 391 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 PLSCR4Q9NRQ2 329 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 SERINC1Q9NRX5 453 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 ARGLU1Q9NWB6 273 aaPredicted RBP13.66□□□□□ -0.22
TRIM28-203ENST00000593582 ZNF226Q9NYT6 803 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 ST6GALNAC2Q9UJ37 374 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 TESMINQ9Y4I5 508 aa13.66□□□□□ -0.22
TRIM28-203ENST00000593582 HRNRQ86YZ3 2850 aaPredicted RBP13.65□□□□□ -0.22
TRIM28-203ENST00000593582 TGDSO95455 350 aa13.65□□□□□ -0.22
TRIM28-203ENST00000593582 ANP32DO95626 131 aa13.65□□□□□ -0.22
TRIM28-203ENST00000593582 C1QCP02747 245 aa13.65□□□□□ -0.22
TRIM28-203ENST00000593582 PGM1P36871 562 aa13.65□□□□□ -0.22
TRIM28-203ENST00000593582 MAGEA8P43361 318 aa13.65□□□□□ -0.22
TRIM28-203ENST00000593582 POLR2JP52435 117 aaKnown RBP13.65□□□□□ -0.22
TRIM28-203ENST00000593582 ART1P52961 327 aa13.65□□□□□ -0.22
TRIM28-203ENST00000593582 IST1P53990 364 aa13.65□□□□□ -0.22
TRIM28-203ENST00000593582 SESN3P58005 492 aa13.65□□□□□ -0.22
TRIM28-203ENST00000593582 KCNJ10P78508 379 aa13.65□□□□□ -0.22
TRIM28-203ENST00000593582 CHRNEQ04844 493 aa13.65□□□□□ -0.22
TRIM28-203ENST00000593582 RNPS1Q15287 305 aaKnown RBP13.65□□□□□ -0.22
TRIM28-203ENST00000593582 EXOC3L2Q2M3D2 409 aa13.65□□□□□ -0.22
TRIM28-203ENST00000593582 C3orf33Q6P1S2 294 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms