RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 ATP12AP54707 1039 aa16.36■□□□□ 0.21
CIRBP-237ENST00000592234 SUMO3P55854 103 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-237ENST00000592234 RNPS1Q15287 305 aaKnown RBP16.36■□□□□ 0.21
CIRBP-237ENST00000592234 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.36■□□□□ 0.21
CIRBP-237ENST00000592234 OR4F3Q6IEY1 312 aa16.36■□□□□ 0.21
CIRBP-237ENST00000592234 RIMKLAQ8IXN7 391 aa16.36■□□□□ 0.21
CIRBP-237ENST00000592234 CIARTQ8N365 385 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-237ENST00000592234 ATP6V1C2Q8NEY4 427 aa16.36■□□□□ 0.21
CIRBP-237ENST00000592234 RNF128Q8TEB7 428 aa16.36■□□□□ 0.21
CIRBP-237ENST00000592234 ABHD3Q8WU67 409 aa16.36■□□□□ 0.21
CIRBP-237ENST00000592234 COQ8BQ96D53 544 aa16.36■□□□□ 0.21
CIRBP-237ENST00000592234 PLPPR2Q96GM1 343 aa16.36■□□□□ 0.21
CIRBP-237ENST00000592234 SRXN1Q9BYN0 137 aa16.36■□□□□ 0.21
CIRBP-237ENST00000592234 BHLHE41Q9C0J9 482 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-237ENST00000592234 OR10A4Q9H209 315 aa16.36■□□□□ 0.21
CIRBP-237ENST00000592234 MARCOQ9UEW3 520 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-237ENST00000592234 ICAM5Q9UMF0 924 aa16.36■□□□□ 0.21
CIRBP-237ENST00000592234 NSD1Q96L73 2696 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-237ENST00000592234 SMAD7O15105 426 aaKnown RBP16.35■□□□□ 0.21
CIRBP-237ENST00000592234 EFNA2O43921 213 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 PTH2RP49190 550 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 NME5P56597 212 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 CLDN8P56748 225 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 CASP8Q14790 479 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 TOMM34Q15785 309 aaPredicted RBP16.35■□□□□ 0.21
CIRBP-237ENST00000592234 NDUFAF6Q330K2 333 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 TMEM176BQ3YBM2 270 aaPredicted RBP16.35■□□□□ 0.21
CIRBP-237ENST00000592234 ALKBH2Q6NS38 261 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 BHLHB9Q6PI77 547 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 FCRLAQ7L513 359 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 TUSC5Q8IXB3 177 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 CLECL1Q8IZS7 167 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 CLEC4FQ8N1N0 589 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 TMCO5AQ8N6Q1 288 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 STEAP2Q8NFT2 490 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 RFWD2Q8NHY2 731 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 GPR119Q8TDV5 335 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 ZFP90Q8TF47 636 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 TMEM171Q8WVE6 324 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 OR7D2Q96RA2 312 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 GSX2Q9BZM3 304 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 DPY30Q9C005 99 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 ASIC5Q9NY37 505 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 NKIRAS1Q9NYS0 192 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 DTNAQ9Y4J8 743 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 USF3Q68DE3 2245 aa16.35■□□□□ 0.21
CIRBP-237ENST00000592234 LY6G6DO95868 133 aa16.34■□□□□ 0.21
CIRBP-237ENST00000592234 PLAUP00749 431 aa16.34■□□□□ 0.21
CIRBP-237ENST00000592234 NID1P14543 1247 aa16.34■□□□□ 0.21
CIRBP-237ENST00000592234 PRKCAP17252 672 aa16.34■□□□□ 0.21
CIRBP-237ENST00000592234 LBPP18428 481 aa16.34■□□□□ 0.21
CIRBP-237ENST00000592234 NUFIP2Q7Z417 695 aaKnown RBP16.34■□□□□ 0.21
CIRBP-237ENST00000592234 OR5D16Q8NGK9 328 aa16.34■□□□□ 0.21
CIRBP-237ENST00000592234 TLCD1Q96CP7 247 aa16.34■□□□□ 0.21
CIRBP-237ENST00000592234 MRGPRX4Q96LA9 322 aa16.34■□□□□ 0.21
CIRBP-237ENST00000592234 TACO1Q9BSH4 297 aaKnown RBP16.34■□□□□ 0.21
CIRBP-237ENST00000592234 HDHD5Q9BXW7 423 aa16.34■□□□□ 0.21
CIRBP-237ENST00000592234 COQ10BQ9H8M1 238 aa16.34■□□□□ 0.21
CIRBP-237ENST00000592234 KLHL13Q9P2N7 655 aa16.34■□□□□ 0.21
CIRBP-237ENST00000592234 HAO1Q9UJM8 370 aa16.34■□□□□ 0.21
CIRBP-237ENST00000592234 GOLGA8QA0A0J9YX86 632 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 GOLGA8OA6NCC3 632 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 TRIM64A6NGJ6 449 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 TRIM64BA6NI03 449 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 NPIPB9F8W1W9 429 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 GOLGA8NF8WBI6 632 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 ZNF264O43296 627 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 PRKD3O94806 890 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 SNUPNO95149 360 aaKnown RBP16.33■□□□□ 0.2
CIRBP-237ENST00000592234 SLC7A1P30825 629 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 CCR4P51679 360 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 HBA1P69905 142 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 SELENBP1Q13228 472 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 CBFBQ13951 182 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 SMU1Q2TAY7 513 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 TFAP2EQ6VUC0 442 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 ANKRD46Q86W74 232 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 TOR1AIP2Q8NFQ8 470 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 ARL8AQ96BM9 186 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 S100PBPQ96BU1 408 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 ARSGQ96EG1 525 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 SDF2Q99470 211 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 CXorf56Q9H5V9 222 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 MEAF6Q9HAF1 191 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 GP6Q9HCN6 339 aa16.33■□□□□ 0.2
CIRBP-237ENST00000592234 DUXAA6NLW8 204 aa16.32■□□□□ 0.2
CIRBP-237ENST00000592234 C9JVG2 144 aa16.32■□□□□ 0.2
CIRBP-237ENST00000592234 SDHDO14521 159 aa16.32■□□□□ 0.2
CIRBP-237ENST00000592234 HS3ST1O14792 307 aa16.32■□□□□ 0.2
CIRBP-237ENST00000592234 EIF4E2O60573 245 aaKnown RBP16.32■□□□□ 0.2
CIRBP-237ENST00000592234 GCM2O75603 506 aaPredicted RBP16.32■□□□□ 0.2
CIRBP-237ENST00000592234 NTN1O95631 604 aa16.32■□□□□ 0.2
CIRBP-237ENST00000592234 CPSF4O95639 269 aaKnown RBP16.32■□□□□ 0.2
CIRBP-237ENST00000592234 FN1P02751 2386 aaKnown RBP16.32■□□□□ 0.2
CIRBP-237ENST00000592234 UBL4AP11441 157 aa16.32■□□□□ 0.2
CIRBP-237ENST00000592234 MATN1P21941 496 aa16.32■□□□□ 0.2
CIRBP-237ENST00000592234 IL32P24001 234 aa16.32■□□□□ 0.2
CIRBP-237ENST00000592234 CASP9P55211 416 aa16.32■□□□□ 0.2
CIRBP-237ENST00000592234 RPS26P62854 115 aaKnown RBP16.32■□□□□ 0.2
CIRBP-237ENST00000592234 QPRTQ15274 297 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms