RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 CDYL2Q8N8U2 506 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 PCYOX1LQ8NBM8 494 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 TMEM171Q8WVE6 324 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 KAT2AQ92830 837 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 POP5Q969H6 163 aaKnown RBP8.49□□□□□ -1.05
BRCA1-226ENST00000591534 EXOSC8Q96B26 276 aaKnown RBP8.49□□□□□ -1.05
BRCA1-226ENST00000591534 PERPQ96FX8 193 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 PINK1Q9BXM7 581 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 MMADHCQ9H3L0 296 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-226ENST00000591534 DSN1Q9H410 356 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 RNF122Q9H9V4 155 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 FOLH1BQ9HBA9 442 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 Q9N2J8 555 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 SLC35C2Q9NQQ7 365 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 FAM120CQ9NX05 1096 aaKnown RBP8.49□□□□□ -1.05
BRCA1-226ENST00000591534 HEY2Q9UBP5 337 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 MARCOQ9UEW3 520 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-226ENST00000591534 AP3M1Q9Y2T2 418 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 DNAJC15Q9Y5T4 150 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 CAPN7Q9Y6W3 813 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 ARHGAP21Q5T5U3 1957 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 NINQ8N4C6 2090 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 A0A087WV62 115 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 DEFB108AA8MXU0 73 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 MANBAO00462 879 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 SEC14L5O43304 696 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 SCO2O43819 266 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 CHRNGP07510 517 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 IL3P08700 152 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 NCF2P19878 526 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-226ENST00000591534 TCEA1P23193 301 aaKnown RBP8.48□□□□□ -1.05
BRCA1-226ENST00000591534 PCSK6P29122 969 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 NTSP30990 170 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 KIR2DL2P43627 348 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-226ENST00000591534 CTBP2P56545 445 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 CORO7P57737 925 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 EMX2Q04743 252 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 DUSP2Q05923 314 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 C17orf67Q0P5P2 114 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 PON3Q15166 354 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 PDCD2Q16342 344 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-226ENST00000591534 COQ5Q5HYK3 327 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 GTF2IRD2BQ6EKJ0 949 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 VWA1Q6PCB0 445 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 ZNF474Q6S9Z5 364 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-226ENST00000591534 FAM214BQ7L5A3 538 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 GTF2IRD2Q86UP8 949 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 MIER2Q8N344 545 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 FADS6Q8N9I5 356 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 VPS37AQ8NEZ2 397 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 OR9A2Q8NGT5 310 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 RP9Q8TA86 221 aaKnown RBP8.48□□□□□ -1.05
BRCA1-226ENST00000591534 RNF138Q8WVD3 245 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 PPP1R14AQ96A00 147 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 EFHD2Q96C19 240 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-226ENST00000591534 RAB3IPQ96QF0 476 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-226ENST00000591534 NUF2Q9BZD4 464 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 TBL1XR1Q9BZK7 514 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 KLHL4Q9C0H6 718 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 OPN3Q9H1Y3 402 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-226ENST00000591534 MIEF1Q9NQG6 463 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 GLRX2Q9NS18 164 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 DDX18Q9NVP1 670 aaKnown RBP8.48□□□□□ -1.05
BRCA1-226ENST00000591534 PNPOQ9NVS9 261 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 C1orf109Q9NX04 203 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 ASIC5Q9NY37 505 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 MCTS1Q9ULC4 181 aaKnown RBP8.48□□□□□ -1.05
BRCA1-226ENST00000591534 TIMM22Q9Y584 194 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 SNX8Q9Y5X2 465 aa8.48□□□□□ -1.05
BRCA1-226ENST00000591534 A0A087WZY1 265 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 A0A1W2PPR1 153 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 CFAP73A6NFT4 308 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 H3BML4 177 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 KCNH1O95259 989 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 SYNGR4O95473 234 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 CNOT4O95628 575 aaKnown RBP8.47□□□□□ -1.05
BRCA1-226ENST00000591534 FESP07332 822 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 ANXA4P09525 319 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-226ENST00000591534 PABPC4LP0CB38 370 aaKnown RBP8.47□□□□□ -1.05
BRCA1-226ENST00000591534 DDCP20711 480 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 TIA1P31483 386 aaKnown RBP eCLIP8.47□□□□□ -1.05
BRCA1-226ENST00000591534 NCBP2P52298 156 aaKnown RBP eCLIP8.47□□□□□ -1.055e-10■■■■■ 33.9
BRCA1-226ENST00000591534 GAS1P54826 345 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 CLDN15P56746 228 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 B3GALT5-AS1P59052 145 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 RAE1P78406 368 aaKnown RBP8.47□□□□□ -1.05
BRCA1-226ENST00000591534 BTKQ06187 659 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 ETFDHQ16134 617 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 SPATS1Q496A3 300 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 VPS26BQ4G0F5 336 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 DNAL1Q4LDG9 190 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 PDSS1Q5T2R2 415 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 PPP4R4Q6NUP7 873 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 GALNT18Q6P9A2 607 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 PLXDC2Q6UX71 529 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 IKBIPQ70UQ0 350 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 R3HCC1LQ7Z5L2 792 aaKnown RBP8.47□□□□□ -1.05
BRCA1-226ENST00000591534 MTDHQ86UE4 582 aaKnown RBP8.47□□□□□ -1.05
BRCA1-226ENST00000591534 METTL25Q8N6Q8 603 aa8.47□□□□□ -1.05
BRCA1-226ENST00000591534 ZNF610Q8N9Z0 462 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms