RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 C12orf71A8MTZ7 269 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 ZNF749O43361 778 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 LALBAP00709 142 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 SPNP16150 400 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 ZNF3P17036 446 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 FUT1P19526 365 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 CFL1P23528 166 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 CD38P28907 300 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 SSTR4P31391 388 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 GALNSP34059 522 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 HSD17B7P56937 341 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 PLAURQ03405 335 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 ALG10BQ5I7T1 473 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 OAFQ86UD1 273 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 MARCH9Q86YJ5 346 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 KLBQ86Z14 1044 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 ARIH2OSQ8N7S6 290 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 SLC37A3Q8NCC5 494 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 SLC2A12Q8TD20 617 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 LMX1AQ8TE12 382 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 TMED9Q9BVK6 235 aa17.69■□□□□ 0.42
PRKCSH-209ENST00000589838 GABRPO00591 440 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 HRO43593 1189 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 IGKV1D-16P01601 117 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 IMPDH2P12268 514 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 CD53P19397 219 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 MLLT3P42568 568 aaPredicted RBP17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 GPR143P51810 404 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 SCN1BQ07699 218 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 GALEQ14376 348 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 KLHL12Q53G59 568 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 ARHGAP11AQ6P4F7 1023 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 MZT2AQ6P582 158 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 THSD4Q6ZMP0 1018 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 GATAD2AQ86YP4 633 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 CHAC2Q8WUX2 184 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 RLN3Q8WXF3 142 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 LRFN5Q96NI6 719 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 ALG8Q9BVK2 526 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 ENKD1Q9H0I2 346 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 MIR1-1HGQ9H1L0 117 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 KCNN2Q9H2S1 579 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 MIXL1Q9H2W2 232 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 LMAN1LQ9HAT1 526 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 MUTYHQ9UIF7 546 aa17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 PAIP2BQ9ULR5 123 aaKnown RBP17.68■□□□□ 0.42
PRKCSH-209ENST00000589838 EFCAB7A8K855 629 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 TGFBR3LH3BV60 316 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 PEPDP12955 493 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 TGM4P49221 684 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 PPM1FP49593 454 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 RPS7P62081 194 aaKnown RBP17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 SERTAD2Q14140 314 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 GAS6Q14393 721 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 TRAM1Q15629 374 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 GLYR1Q49A26 553 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 LINC00114Q6XXX2 140 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 AKAP14Q86UN6 197 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 GPALPP1Q8IXQ4 340 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 RCBTB1Q8NDN9 531 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 OR4N2Q8NGD1 307 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 OR51A7Q8NH64 312 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 NEIL3Q8TAT5 605 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 PTCHD1Q96NR3 888 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 TEAD3Q99594 435 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 MED20Q9H944 212 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 TRIM36Q9NQ86 728 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 PRODH2Q9UF12 536 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 EPHA6Q9UF33 1036 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 GRIP1Q9Y3R0 1128 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 OR10H1Q9Y4A9 318 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 METTL12A8MUP2 240 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 NPIPB9F8W1W9 429 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 RGS9O75916 674 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 NOS3P29474 1203 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 GPR3P46089 330 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 FUT7Q11130 342 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 POU4F2Q12837 409 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 SMAD4Q13485 552 aaKnown RBP17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 ZNF79Q15937 498 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 ZNF440Q8IYI8 595 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 CAMKK1Q8N5S9 505 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 PTP4A1Q93096 173 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 MMABQ96EY8 250 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 PHF7Q9BWX1 381 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 HDHD5Q9BXW7 423 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 CHRNA10Q9GZZ6 450 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 PCED1AQ9H1Q7 454 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 OR10A5Q9H207 317 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 PDE7BQ9NP56 450 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 MKKSQ9NPJ1 570 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 HAO2Q9NYQ3 351 aa17.67■□□□□ 0.42
PRKCSH-209ENST00000589838 TRAV27A0A087WT01 109 aa17.66■□□□□ 0.42
PRKCSH-209ENST00000589838 TLCD2A6NGC4 264 aa17.66■□□□□ 0.42
PRKCSH-209ENST00000589838 H0YIG0 161 aa17.66■□□□□ 0.42
PRKCSH-209ENST00000589838 RNF13O43567 381 aa17.66■□□□□ 0.42
PRKCSH-209ENST00000589838 TMCC2O75069 709 aa17.66■□□□□ 0.42
PRKCSH-209ENST00000589838 PPM1BO75688 479 aa17.66■□□□□ 0.42
PRKCSH-209ENST00000589838 MT-ND5P03915 603 aa17.66■□□□□ 0.42
PRKCSH-209ENST00000589838 IL7P13232 177 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms