RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 DLX5P56178 289 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 EEF1A1P68104 462 aaKnown RBP12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 SIRPAP78324 504 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 KCNJ10P78508 379 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 GUCY1A3Q02108 690 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 SF3A3Q12874 501 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 MYBPHQ13203 477 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 SNTB1Q13884 538 aaKnown RBP12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 GNA13Q14344 377 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 PAGE3Q5JUK9 113 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 EEF1A1P5Q5VTE0 462 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 AP1ARQ63HQ0 302 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 HBMQ6B0K9 141 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 ESPNLQ6ZVH7 1005 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 LUZP2Q86TE4 346 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 ZNF295-AS1Q8N0V1 137 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 ZNF563Q8TA94 476 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 RNASE6Q93091 150 aaKnown RBP12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 ZNF524Q96C55 264 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 MRGPRX4Q96LA9 322 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 KLHL15Q96M94 604 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 TREX2Q9BQ50 279 aaPredicted RBP12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 TMEM120AQ9BXJ8 343 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 RAD21L1Q9H4I0 556 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 FGFR1OP2Q9NVK5 253 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 THUMPD1Q9NXG2 353 aaKnown RBP12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 PAQR5Q9NXK6 330 aaPredicted RBP12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 CALML5Q9NZT1 146 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 SLAMF8Q9P0V8 285 aa12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 MCTS1Q9ULC4 181 aaKnown RBP12.67□□□□□ -0.38
CLPTM1-210ENST00000589158 A0A1W2PP18 115 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 GJE1A6NN92 205 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 ADAMDEC1O15204 470 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 EFNA2O43921 213 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 BCAS1O75363 584 aaPredicted RBP12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 CRHP06850 196 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 DBIP07108 87 aaKnown RBP12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 TFPTP0C1Z6 253 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 FCGR2AP12318 317 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 CD1EP15812 388 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 SHC1P29353 583 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 SSTR2P30874 369 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 CPA2P48052 419 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 CRISP3P54108 245 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 CARD18P57730 90 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 RGNQ15493 299 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 CTU2Q2VPK5 515 aaKnown RBP12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 TMEM176BQ3YBM2 270 aaPredicted RBP12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 FBXL19-AS1Q494R0 122 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 PEX5LQ8IYB4 626 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 SLC38A5Q8WUX1 472 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 WDR60Q8WVS4 1066 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 TMEM234Q8WY98 164 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 ST8SIA1Q92185 356 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 CNOT9Q92600 299 aaKnown RBP12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 PMM1Q92871 262 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 OSTF1Q92882 214 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 ADGRG7Q96K78 797 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 PIGMQ9H3S5 423 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 CACYBPQ9HB71 228 aaKnown RBP12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 SLC24A3Q9HC58 644 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 SLC52A3Q9NQ40 469 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 TIGARQ9NQ88 270 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 FOXD3Q9UJU5 478 aaPredicted RBP12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 PACSIN3Q9UKS6 424 aa12.66□□□□□ -0.38
CLPTM1-210ENST00000589158 TNFSF13O75888 250 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 SMNDC1O75940 238 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 AQP8O94778 261 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 NTN1O95631 604 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 PLGP00747 810 aaPredicted RBP12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 NUDT7P0C024 238 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 SLC7A1P30825 629 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 KIR2DL3P43628 341 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 SLC6A8P48029 635 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 ARFIP2P53365 341 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 SESN3P58005 492 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 TLE4Q04727 773 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 MERTKQ12866 999 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 SELENBP1Q13228 472 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 MAPK11Q15759 364 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 SLC25A53Q5H9E4 307 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 RPS26P11Q5JNZ5 115 aaPredicted RBP12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 LRIF1Q5T3J3 769 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 METTL21CQ5VZV1 264 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 MSRB3Q8IXL7 192 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 CMIPQ8IY22 773 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 FAM71CQ8NEG0 241 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 OR52P1PQ8NH57 321 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 TMEM19Q96HH6 336 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 ZNF559Q9BR84 538 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 RBM24Q9BX46 236 aaKnown RBP12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 RNF122Q9H9V4 155 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 SERINC1Q9NRX5 453 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 ACER3Q9NUN7 267 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 SLC25A37Q9NYZ2 338 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 JKAMPQ9P055 326 aa12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 PHF3Q92576 2039 aaKnown RBP12.65□□□□□ -0.38
CLPTM1-210ENST00000589158 MAST4O15021 2626 aa12.64□□□□□ -0.39
CLPTM1-210ENST00000589158 PCNX1Q96RV3 2341 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms