RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 H0Y8X5 98 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 RGS13O14921 159 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 LINC01565O15544 149 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 SLC19A2O60779 497 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 RGS9O75916 674 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 APOL3O95236 402 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 GUSBP08236 651 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 MSL3P1P0C860 447 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 SLC35E2P0CK97 266 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 IFI30P13284 250 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 CTSEP14091 401 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF3P17036 446 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 RPS4Y1P22090 263 aaKnown RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 NOS3P29474 1203 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 ACSL1P33121 698 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 GABRA3P34903 492 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 CASP3P42574 277 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 TPMTP51580 245 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 LBX1P52954 281 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 RPS25P62851 125 aaKnown RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 SUMO1P63165 101 aaKnown RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 ASAH1Q13510 395 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 NDUFA5Q16718 116 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 ALG11Q2TAA5 492 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 AMZ1Q400G9 498 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 LCN1P1Q5VSP4 162 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 RSBN1Q5VWQ0 802 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 TRIQKQ629K1 86 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 FCRL6Q6DN72 434 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 SMARCD3Q6STE5 483 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF322Q6U7Q0 402 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 RTL4Q6ZR62 310 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 TMPRSS11FQ6ZWK6 438 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 NRARPQ7Z6K4 114 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 MEX3DQ86XN8 651 aaKnown RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 CACTIN-AS1Q8N1I8 211 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 LNX2Q8N448 690 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 FAM181AQ8N9Y4 354 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 AVL9Q8NBF6 648 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 ATP6V1C2Q8NEY4 427 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 OR4F15Q8NGB8 312 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 OR4Q3Q8NH05 313 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 CCL4L1Q8NHW4 92 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 FLVCR1-AS1Q8TAF5 88 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 NACC2Q96BF6 587 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 BPIFA2Q96DR5 249 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 TRMT61AQ96FX7 289 aaKnown RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 RBM18Q96H35 190 aaKnown RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 NECTIN4Q96NY8 510 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 SDHCQ99643 169 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 NDC1Q9BTX1 674 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 TMED9Q9BVK6 235 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 TRIM2Q9C040 744 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 NKX2-4Q9H2Z4 354 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 TIGARQ9NQ88 270 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 BABAM2Q9NXR7 383 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 FRRS1LQ9P0K9 344 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 MUTYHQ9UIF7 546 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 CHD7Q9P2D1 2997 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 LOC105369274A0A096LPK9 316 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 LOC102723532A0A0G2JNH3 316 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 CLDN4O14493 209 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 POLR1CO15160 346 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 P2RX6O15547 441 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 BRINP1O60477 761 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 GALR3O60755 368 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 LDB3O75112 727 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 SEMA4FO95754 770 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 MT-ND5P03915 603 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 TRAPPC2P0DI81 140 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 TRAPPC2BP0DI82 140 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 SLC2A2P11168 524 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 NUDT1P36639 197 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 TALDO1P37837 337 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 RBM34P42696 430 aaKnown RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF136P52737 540 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 RPS7P62081 194 aaKnown RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 ACTC1P68032 377 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 ACTA1P68133 377 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 FABP5Q01469 135 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 CD300CQ08708 224 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 ADAM15Q13444 863 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 GAS6Q14393 721 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 KCNJ8Q15842 424 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 GLYR1Q49A26 553 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 FLYWCH1Q4VC44 716 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 FHL5Q5TD97 284 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 RNF44Q7L0R7 432 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF550Q7Z398 422 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 TAF8Q7Z7C8 310 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 UBQLNLQ8IYU4 475 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 OR4N4Q8N0Y3 316 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 OR51G2Q8NGK0 314 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 ENKURQ8TC29 256 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 SLC2A12Q8TD20 617 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 DNAJA4Q8WW22 397 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 SPRYD4Q8WW59 207 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 FAM3CQ92520 227 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 SLC35B4Q969S0 331 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 TP53INP1Q96A56 240 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms