RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 MESP1Q9BRJ9 268 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 ADNPQ9H2P0 1102 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 RYDENQ9NUL5 291 aaKnown RBP11.07□□□□□ -0.64
CCBE1-203ENST00000589116 IMPAD1Q9NX62 359 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 FLRT3Q9NZU0 649 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 SELENONQ9NZV5 590 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 RPS6KB2Q9UBS0 482 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 TMEM5Q9Y2B1 443 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 NPFFR2Q9Y5X5 522 aa11.07□□□□□ -0.64
CCBE1-203ENST00000589116 PCNX2A6NKB5 2137 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 IGHV1-45A0A0A0MS14 117 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 C9orf172C9J069 976 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 H3BN98 237 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 GTPBP1O00178 669 aaKnown RBP11.06□□□□□ -0.64
CCBE1-203ENST00000589116 SLC1A7O00341 560 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 KLF4O43474 513 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 EIF4E2O60573 245 aaKnown RBP11.06□□□□□ -0.64
CCBE1-203ENST00000589116 ADAM11O75078 769 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 OR6B1O95007 311 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 TP53P04637 393 aaPredicted RBP11.06□□□□□ -0.64
CCBE1-203ENST00000589116 STAT5AP42229 794 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 SLC6A8P48029 635 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 GTF2A1P52655 376 aaPredicted RBP11.06□□□□□ -0.64
CCBE1-203ENST00000589116 NR1H2P55055 460 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 CLDN6P56747 220 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 CD226Q15762 336 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 C19orf48Q6RUI8 117 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 PRICKLE2Q7Z3G6 844 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 NRMQ8IXM6 262 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 ESX1Q8N693 406 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 CLDN22Q8N7P3 220 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 POGLUT1Q8NBL1 392 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 CNIH3Q8TBE1 160 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 ELP5Q8TE02 316 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 ZNF426Q9BUY5 554 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 TBL1XR1Q9BZK7 514 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 LAT2Q9GZY6 243 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 HS3ST3B1Q9Y662 390 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 NBEAQ8NFP9 2946 aa11.06□□□□□ -0.64
CCBE1-203ENST00000589116 DPPA5A6NC42 116 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 SOX14O95416 240 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 NADKO95544 446 aaPredicted RBP11.05□□□□□ -0.64
CCBE1-203ENST00000589116 LINGO3P0C6S8 592 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 COX6A1P12074 109 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 ATP6V1B1P15313 513 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 POU1F1P28069 291 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 EVI2BP34910 448 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 IDH2P48735 452 aaKnown RBP11.05□□□□□ -0.64
CCBE1-203ENST00000589116 CTBP2P56545 445 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 PRKCDQ05655 676 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 ALG10BQ5I7T1 473 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 PLAG1Q6DJT9 500 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 LAIR2Q6ISS4 152 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 APOOLQ6UXV4 268 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 WDR88Q6ZMY6 472 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 Q6ZPB1 254 aaPredicted RBP11.05□□□□□ -0.64
CCBE1-203ENST00000589116 P3H2Q8IVL5 708 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 MISPQ8IVT2 679 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 SLC15A4Q8N697 577 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 DEFB124Q8NES8 71 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 RHOXF1Q8NHV9 184 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 M1APQ8TC57 530 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 SLC22A8Q8TCC7 542 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 GRHL3Q8TE85 626 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 CT55Q8WUE5 264 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 NACC2Q96BF6 587 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 FAM46AQ96IP4 442 aaKnown RBP11.05□□□□□ -0.64
CCBE1-203ENST00000589116 IMMP1LQ96LU5 166 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 GPA33Q99795 319 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 SLC25A19Q9HC21 320 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 MMP25Q9NPA2 562 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 SCN3BQ9NY72 215 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 MYOTQ9UBF9 498 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 TCFL5Q9UL49 500 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 RNF6Q9Y252 685 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 TPRKBQ9Y3C4 175 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 MED31Q9Y3C7 131 aa11.05□□□□□ -0.64
CCBE1-203ENST00000589116 DSPP15924 2871 aaKnown RBP11.05□□□□□ -0.64
CCBE1-203ENST00000589116 A0A1W2PNU3 283 aaPredicted RBP11.04□□□□□ -0.64
CCBE1-203ENST00000589116 PMS2P1A4D2B8 440 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 HTR3EA5X5Y0 456 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 TMEM200CA6NKL6 621 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 NDUFB5O43674 189 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 PIP5K1CO60331 668 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 FADS1O60427 444 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 TFAP2AP05549 437 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 TCN2P20062 427 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 LSM11P83369 360 aaKnown RBP eCLIP11.04□□□□□ -0.64
CCBE1-203ENST00000589116 BTBD16Q32M84 506 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 NDUFAF6Q330K2 333 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 C3orf38Q5JPI3 329 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 BROXQ5VW32 411 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 C12orf73Q69YU5 71 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 WBP2NLQ6ICG8 309 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 ZNF773Q6PK81 442 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 KIRREL2Q6UWL6 708 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 LINC00114Q6XXX2 140 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 TIPARPQ7Z3E1 657 aaKnown RBP11.04□□□□□ -0.64
CCBE1-203ENST00000589116 CDK20Q8IZL9 346 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 CADM2Q8N3J6 435 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms