RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 SFTPDP35247 375 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 CCR4P51679 360 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 CTBP2P56545 445 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 CARD18P57730 90 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 SELENBP1Q13228 472 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 QPRTQ15274 297 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 GSTA3Q16772 222 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 NDUFAF6Q330K2 333 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 GTF2IRD2BQ6EKJ0 949 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 TYW3Q6IPR3 259 aaKnown RBP12.94□□□□□ -0.34
DDX39A-208ENST00000588692 ZNF474Q6S9Z5 364 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-208ENST00000588692 GTF2IRD2Q86UP8 949 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 RFWD2Q8NHY2 731 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 ST8SIA1Q92185 356 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 ZNF75CPQ92670 426 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-208ENST00000588692 OSTF1Q92882 214 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 RAB8BQ92930 207 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 REXO5Q96IC2 774 aaKnown RBP12.94□□□□□ -0.34
DDX39A-208ENST00000588692 ZIM2Q9NZV7 527 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 ST6GALNAC2Q9UJ37 374 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 KCNE5Q9UJ90 142 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 LIPT1Q9Y234 373 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 SLC35A3Q9Y2D2 325 aa12.94□□□□□ -0.34
DDX39A-208ENST00000588692 F8P00451 2351 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 HMGN4O00479 90 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 CASKO14936 926 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 SLC22A3O75751 556 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 OPN1LWP04000 364 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 POU2F1P14859 743 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 CD1EP15812 388 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 MAGEA8P43361 318 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 KCNJ5P48544 419 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 CASP9P55211 416 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 FAM27E3Q08E93 113 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 FUT5Q11128 374 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 TOMM34Q15785 309 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-208ENST00000588692 ZNF239Q16600 458 aaKnown RBP12.93□□□□□ -0.34
DDX39A-208ENST00000588692 SLC9B1Q4ZJI4 515 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 FRRS1Q6ZNA5 592 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 MSANTD1Q6ZTZ1 278 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 MAVSQ7Z434 540 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 ZNF619Q8N2I2 560 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 FAM71CQ8NEG0 241 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 RNF128Q8TEB7 428 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 ZFP90Q8TF47 636 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 NRGNQ92686 78 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 C7orf26Q96N11 449 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 TRNT1Q96Q11 434 aaKnown RBP12.93□□□□□ -0.34
DDX39A-208ENST00000588692 FANCFQ9NPI8 374 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 SDR39U1Q9NRG7 319 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-208ENST00000588692 PLSCR4Q9NRQ2 329 aa12.93□□□□□ -0.34
DDX39A-208ENST00000588692 CENPVL1A0A0U1RR11 272 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 C9JVG2 144 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 C16orf97H3BN30 126 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 RFXANKO14593 260 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 UBDO15205 165 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 EFNA2O43921 213 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 HRGP04196 525 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 NID1P14543 1247 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 PGCP20142 388 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 SHC1P29353 583 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 UGT2B10P36537 528 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 RNPS1Q15287 305 aaKnown RBP12.92□□□□□ -0.34
DDX39A-208ENST00000588692 GPAT3Q53EU6 434 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 C3orf33Q6P1S2 294 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 ZNF621Q6ZSS3 439 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 RNF130Q86XS8 419 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 ZNF610Q8N9Z0 462 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 TMEM234Q8WY98 164 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 PMM1Q92871 262 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 ATP6V1G3Q96LB4 118 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 INPP5KQ9BT40 448 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 THUMPD3Q9BV44 507 aaKnown RBP12.92□□□□□ -0.34
DDX39A-208ENST00000588692 GP6Q9HCN6 339 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 ZNF226Q9NYT6 803 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 USH1CQ9Y6N9 552 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 ABCA4P78363 2273 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 AKAP6Q13023 2319 aa12.92□□□□□ -0.34
DDX39A-208ENST00000588692 DIAPH2O60879 1101 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 CYP7B1O75881 506 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 H6PDO95479 791 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 KRT75O95678 551 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 UBTFL6P0CB48 400 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-208ENST00000588692 DNASE1P24855 282 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 SLC7A1P30825 629 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 CCKARP32238 428 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 PGM1P36871 562 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 CDKN2CP42773 168 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 ART1P52961 327 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 IST1P53990 364 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 MAPK14Q16539 360 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 TMEM176BQ3YBM2 270 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-208ENST00000588692 PAMR1Q6UXH9 720 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 OLIG3Q7RTU3 272 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 STK32CQ86UX6 486 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 CMIPQ8IY22 773 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 LRRC8CQ8TDW0 803 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 OR52B2Q96RD2 323 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 FOXC2Q99958 501 aa12.91□□□□□ -0.34
DDX39A-208ENST00000588692 MED18Q9BUE0 208 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms